| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0337 |
|---|
| Symbol | |
|---|
| ID | 5707974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 375767 |
|---|
| End bp | 376486 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641269863 |
|---|
| Product | winged helix family two component response transcriptional regulator |
|---|
| Protein accession | YP_001535258 |
|---|
| Protein GI | 159036005 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0279779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTGG AGATCCTGCT TCTGGTGACG GCACGCGCAG GTGAACCGTC CGCTGTACTG
CCAGCGCTGG ACCTGCTGCC CCACTCGATT CGCACCGCAC CGCGCGACGT ACGCACCCTG
GTCGCCGGCC CCAGTCCGGA CGCGGTCCTG ATCGACGCCC GCTCCGAGCT CAGCGAGGCC
CGGGCCACCT GCCGCATGCT GCACGCCACC GGTCTCAACG CGCCTCTACT CGCGGTCGTC
ACCGAGGCCG GCCTGATCGC GCTCAACGCT GACTGGGGGG TGGATGACGT CGTCCTCGCC
TCAGCGGGCC CGGCCGAAGT CGAAGCCAGA CTGCGGTTGG TGGTCGGCCG GCGCAACGAC
ACGGTCGCGA GGGCCGACAG CTCGGTTCGT GCCGGCGAAC TGACCATCGA CCCGGAAACC
TACGCCGCGA AGCTGAAGGG CCGCCCGCTC GACCTCACGT ACAAGGAGTT CGAGCTGCTC
AAATTCCTGG CGCAGCACCC GGGACGGGTC TTCACTCGAG ACCAGCTGCT GCGCGAGGTG
TGGGGCTACG ACTACTTCGG TGGAACCCGC ACCGTGGACG TGCACGTCCG ACGGTTGCGC
GCCAAGCTCG GCTCCGAGTA TGAGTCGATG ATCGGCACGG TCCGCCAGGT CGGCTACAAG
TTCGTCGTCC CGCCGTCCCG GGCGTTGCCG GAAAAGGAGC CCGCACCGGC CTCCGTCTGA
|
|---|
| Protein sequence | MIVEILLLVT ARAGEPSAVL PALDLLPHSI RTAPRDVRTL VAGPSPDAVL IDARSELSEA
RATCRMLHAT GLNAPLLAVV TEAGLIALNA DWGVDDVVLA SAGPAEVEAR LRLVVGRRND
TVARADSSVR AGELTIDPET YAAKLKGRPL DLTYKEFELL KFLAQHPGRV FTRDQLLREV
WGYDYFGGTR TVDVHVRRLR AKLGSEYESM IGTVRQVGYK FVVPPSRALP EKEPAPASV
|
|---|
| |