| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2286 |
|---|
| Symbol | |
|---|
| ID | 7259255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2469726 |
|---|
| End bp | 2470421 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643562173 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002458753 |
|---|
| Protein GI | 219668318 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000000188753 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACTC TATTGATTGC CGATGATAAT AAACAAATTA CATCGATCTT AGAAGAATAT
GCGAAAAAAG AAGGCTATCA GCCTCATATA GCCTGGGATG GCTGCGCAGC TCTGGAACTT
TTTCAGCAGC TTCAACCCGA TCTGGTCTTA TTGGATGTAA TGATGCCTAA AGTTGATGGT
TTTGAAGTCT GCCGGGAAAT TCGTAAAACT TCCAACGTCC CCATCATCAT GATTACTGCT
CGGGGGGAGG ATTTTGAAAG GATCATGGGG CTGGATATCG GGGCGGATGA TTATATCGTC
AAGCCCTTTT CCCCCGGCGA AGTGATGGCG AGAATCCGCG CCATTCTGCG CAGAATCAGT
CAAAACGACG AGGAGAAAAA ACAAATCCTG TCTTATGCTA ACCTGATGAT CAATCTGGAT
GACTATCTTG TGACCATTGA TCAATGCCCG GTCTCCTTAA CCAAGAAAGA GATCGAAATC
CTCTGGACTC TGGCAACGAA TCACAACAGA GTGTTCTCCC GGGATAATCT GCTCAACAGC
GTATGGGGCT ATGATTACTT TGGCGATATC CGTACCGTGG ATTCCCATAT TAAACGTTTG
CGTTCCAAAC TGGATTCCTT CCCCCATGAA CAATGGGAGA TTAAGACCAT TTGGGGTGTA
GGCTATAAAT TCGGGGAGAA AACCAATGAA GAATAA
|
|---|
| Protein sequence | MLTLLIADDN KQITSILEEY AKKEGYQPHI AWDGCAALEL FQQLQPDLVL LDVMMPKVDG
FEVCREIRKT SNVPIIMITA RGEDFERIMG LDIGADDYIV KPFSPGEVMA RIRAILRRIS
QNDEEKKQIL SYANLMINLD DYLVTIDQCP VSLTKKEIEI LWTLATNHNR VFSRDNLLNS
VWGYDYFGDI RTVDSHIKRL RSKLDSFPHE QWEIKTIWGV GYKFGEKTNE E
|
|---|
| |