Gene DET1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1126 
Symbol 
ID3229542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1030278 
End bp1030949 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID637120690 
Producttranscriptional regulator 
Protein accessionYP_181841 
Protein GI57234076 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000289398 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAAAAC TGTTTATTGT GACTGCAGAT ACTAAAAAAA TGGGCAGTTT GCTTAGGGAA 
CTGGAGGCTG ACCGGTTTGA AATAAAACAG GCGGCCTCTT TTGTTTTGGC TTATCCTCTG
CTTGCTGAAT TTGTACCTGA TATTGTCCTG CTGGATTTTC TTAGCCTGAA AACTGAGGAA
TCCGAATGGG AAATCCCGGA AAATGTTTCC TTAGCCAAAA ACCCCCTTAT TATGGGCCTG
CTGCCGGCAG ATGATTACGA AGAAATAGCC CTTAAACCGG GATTGGATGA CTTTATCCGC
TGGCCGGGTT CGGTAAATGA GCTTAAAGTG CGGCTGGTGC GGCTGGCTGA AAAATGGGGC
ATGAGTGAGC CGGGTATTAT CCGGGCCGGT GACCTCATAA TAGATACCCT TGGCTGTGAA
GTCACTCTGT CAGGGCGGCT GCTTGACCTG ACCTTCCGTG AATTTGAGCT TTTAAAATTT
TTAGCCCAAA ACCGGGGGCG GGTTTTTTCG CGTGAGGCTT TGCTTAACAA AGTGTGGGGT
TATGACTATT ACGGCGGAGA CCGCACGGTT GATGTCCACA TAACCCGCCT GCGCGGCAAA
ATAGAAGACC AGACCCATAC CTTTGTTGAG ACTGTGCGTA ACATAGGCTA CCGTTTTAAA
CGCCGGTTTT AA
 
Protein sequence
MLKLFIVTAD TKKMGSLLRE LEADRFEIKQ AASFVLAYPL LAEFVPDIVL LDFLSLKTEE 
SEWEIPENVS LAKNPLIMGL LPADDYEEIA LKPGLDDFIR WPGSVNELKV RLVRLAEKWG
MSEPGIIRAG DLIIDTLGCE VTLSGRLLDL TFREFELLKF LAQNRGRVFS REALLNKVWG
YDYYGGDRTV DVHITRLRGK IEDQTHTFVE TVRNIGYRFK RRF