Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8253 |
Symbol | |
ID | 8339632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9561992 |
End bp | 9562786 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961339 |
Product | putative two component transcriptional regulator, winged helix family |
Protein accession | YP_003118917 |
Protein GI | 256397353 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTT TGCTGTTGTT GACCAACTCA CTGACCCCCT CCTCCGAGGT CCTGCCGGCT CTCGGGCTGC TGTTGCACAA CGTTCGCGTG GCTCCAGCGG AGGCATCCGC CCTGCTCGAC ACCCCGCCGG CCGACGCGAT CCTCGTGGAC GCCCGCCGGG ACCTGCCGCA GATGCGCTCG CTGTGCCGGC TGCTGCGCAC CACCGGGGTG GACTGCCCGC TGCTGCTGAT CACCACCGAG GGCGCGCTGG CGGCGGTGAC CGCCGACTGG GGCATCGACG ACGTGCTGCT GGACTCGGCG GGCCCGGCCG AGGTCGAGGC CCGGCTGCGG CTGGCGATCG GGAAGCTGGC GGCCGGCGCG GTCGCCGAGG ACGTCCCGCT GGAGATCAAG AGCGGCGACC TGTCCATCGA CGAGGGCACG TACACCGCCC GCGTCCGGAA CCGGATCCTC GACCTGACCT TCAAGGAGTT CGAGCTCATC AAGTACCTCG CGCAGCACCC CGGCCGGGTG TTCACGCGGG CGCAGCTGCT TCAGGAAGTG TGGGGATACG ACTACTTCGG CGGTACCCGC ACCGTGGACG TCCACGTCCG GCGGCTGCGG GCCAAGCTCG GGGTCGAGCA CGAGGCGCTG ATCGGGACCG TGCGCAACGT AGGGTACCGG TTCGTCATGC CCGACAAGCG GAGCAGCTCC AGCACGCCGG CCGGCTCCAG CGCCGGTACC GAGGCGGAAG AGGAGGGCGC CGACGAGGTT CGAGCCTCCG ACGCGCTGAC CGCACCCCGT ACCGTGGTGG GGTGA
|
Protein sequence | MSSLLLLTNS LTPSSEVLPA LGLLLHNVRV APAEASALLD TPPADAILVD ARRDLPQMRS LCRLLRTTGV DCPLLLITTE GALAAVTADW GIDDVLLDSA GPAEVEARLR LAIGKLAAGA VAEDVPLEIK SGDLSIDEGT YTARVRNRIL DLTFKEFELI KYLAQHPGRV FTRAQLLQEV WGYDYFGGTR TVDVHVRRLR AKLGVEHEAL IGTVRNVGYR FVMPDKRSSS STPAGSSAGT EAEEEGADEV RASDALTAPR TVVG
|
| |