More than 300 homologs were found in PanDaTox collection
for query gene Ccur_08240 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  100 
 
 
236 aa  486  1e-136  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  62.16 
 
 
224 aa  278  5e-74  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  46.36 
 
 
224 aa  201  9e-51  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.74 
 
 
224 aa  185  5e-46  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  55.65 
 
 
217 aa  133  3e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  51.61 
 
 
239 aa  131  9e-30  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0279779 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  48.44 
 
 
253 aa  129  6e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  51.59 
 
 
236 aa  126  3e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  50.78 
 
 
257 aa  125  5e-28  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  49.19 
 
 
239 aa  124  2e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  49.21 
 
 
248 aa  122  4e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.190602 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.41 
 
 
249 aa  122  5e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  46.88 
 
 
232 aa  121  9e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  48.41 
 
 
232 aa  120  1.9999999999999998e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  50 
 
 
240 aa  120  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  48.44 
 
 
243 aa  119  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  48 
 
 
232 aa  119  3.9999999999999996e-26  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  47.29 
 
 
255 aa  119  4.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  36.87 
 
 
256 aa  119  4.9999999999999996e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0528352 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  47.66 
 
 
241 aa  118  6e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000121276 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  46.4 
 
 
278 aa  118  7.999999999999999e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  47.62 
 
 
243 aa  117  9.999999999999999e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  46.4 
 
 
267 aa  117  9.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  45.6 
 
 
257 aa  116  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  45.6 
 
 
257 aa  116  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  45.6 
 
 
257 aa  116  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  43.48 
 
 
266 aa  115  3.9999999999999997e-25  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  48 
 
 
250 aa  115  3.9999999999999997e-25  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  48.8 
 
 
237 aa  115  3.9999999999999997e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  46.4 
 
 
250 aa  115  5e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  41.38 
 
 
296 aa  115  5e-25  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  49.21 
 
 
251 aa  115  6e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  44.8 
 
 
255 aa  115  6e-25  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00597919 
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  39.55 
 
 
238 aa  115  6.9999999999999995e-25  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  46.03 
 
 
261 aa  114  8.999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  47.2 
 
 
247 aa  114  8.999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.186762 
 
 
-
 
NC_002936  DET1126  transcriptional regulator  41.18 
 
 
223 aa  114  1.0000000000000001e-24  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  40 
 
 
249 aa  114  1.0000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  49.21 
 
 
237 aa  114  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  42.38 
 
 
226 aa  111  8.000000000000001e-24  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  44.37 
 
 
223 aa  111  8.000000000000001e-24  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  41.51 
 
 
230 aa  111  8.000000000000001e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  44.37 
 
 
223 aa  111  8.000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  46.77 
 
 
258 aa  110  2.0000000000000002e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  55.91 
 
 
259 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  53.85 
 
 
270 aa  107  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  43.28 
 
 
229 aa  107  2e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  45.24 
 
 
264 aa  105  5e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  45.6 
 
 
223 aa  105  6e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  43.18 
 
 
232 aa  104  2e-21  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  45.16 
 
 
236 aa  102  5e-21  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  38.36 
 
 
235 aa  102  5e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  36.73 
 
 
227 aa  102  6e-21  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  44 
 
 
231 aa  101  8e-21  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  47.92 
 
 
242 aa  101  1e-20  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  38.58 
 
 
223 aa  100  2e-20  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  37.8 
 
 
223 aa  100  2e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  37.8 
 
 
223 aa  100  2e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3429  two component transcriptional regulator  37.78 
 
 
233 aa  100  2e-20  Clostridium phytofermentans ISDg  Bacteria  normal  0.0608192  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  46.39 
 
 
239 aa  100  2e-20  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  46.39 
 
 
239 aa  100  2e-20  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  38.58 
 
 
223 aa  100  2e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  38.58 
 
 
223 aa  100  2e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  43.31 
 
 
231 aa  100  2e-20  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  38.58 
 
 
223 aa  100  3e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  38.58 
 
 
223 aa  100  3e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1658  two component transcriptional regulator, winged helix family  38.93 
 
 
230 aa  99.8  3e-20  Clostridium cellulolyticum H10  Bacteria  normal  0.515101  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  37.8 
 
 
223 aa  99.8  4e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  42.42 
 
 
228 aa  99  6e-20  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  40 
 
 
239 aa  99  6e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  45.24 
 
 
228 aa  97.8  1e-19  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  39.26 
 
 
239 aa  98.2  1e-19  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  42.19 
 
 
231 aa  97.8  1e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  31.28 
 
 
224 aa  97.4  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  38.58 
 
 
223 aa  96.7  3e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  37.8 
 
 
223 aa  96.7  3e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0578  two component transcriptional regulator  41.8 
 
 
240 aa  96.7  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1917  two component transcriptional regulator  39.69 
 
 
238 aa  96.3  4e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.332821 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  39.84 
 
 
252 aa  95.9  5e-19  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal 
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  41.67 
 
 
230 aa  95.5  6e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_008699  Noca_2939  response regulator receiver  40.94 
 
 
232 aa  95.5  6e-19  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.54 
 
 
261 aa  95.5  6e-19  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal 
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  43.44 
 
 
225 aa  95.1  8e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  43.44 
 
 
225 aa  95.1  8e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  42.52 
 
 
229 aa  95.1  9e-19  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  36.15 
 
 
233 aa  94.7  1e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  35.66 
 
 
223 aa  94.4  1e-18  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013946  Mrub_1539  two component transcriptional regulator, winged helix family  37.58 
 
 
222 aa  94  2e-18  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000287281  normal  0.103291 
 
 
-
 
NC_008010  Dgeo_2598  two component transcriptional regulator  44.35 
 
 
134 aa  94  2e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.157515  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  40.94 
 
 
231 aa  93.6  2e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  34.19 
 
 
225 aa  93.6  2e-18  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1397  two component transcriptional regulator  43.18 
 
 
261 aa  94  2e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.0231814  hitchhiker  0.000111966 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  38.64 
 
 
230 aa  93.2  3e-18  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  43.3 
 
 
227 aa  93.2  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_009441  Fjoh_0544  two component transcriptional regulator  38.74 
 
 
227 aa  92.8  4e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  31.19 
 
 
228 aa  93.2  4e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  34.62 
 
 
230 aa  92.8  4e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  39.68 
 
 
230 aa  92.8  4e-18  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  50.52 
 
 
231 aa  92.4  5e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  35.38 
 
 
228 aa  92.4  5e-18  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
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