Gene Ksed_03550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03550 
Symbol 
ID8371865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp341429 
End bp342214 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content78% 
IMG OID644990651 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003148196 
Protein GI256824236 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.329191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG TCGTCCTGCT CCACCGAGGA CCGGCGCCCG CGCTGGACTC CCCGGCCCTC 
GAGGCGATGG CGCTGCTCGA CTGGACGGTG GAGCCGATGG GGGTCGGTCC CGGCCCCGCG
CAGCCGCCCC GCTCCCCCGG CGAGCCTCCC CCCGTGTTGG TGGTTGACGC GCGCGACCAG
CTGGCGGCCC ACCGCGACCT CGCCCGCGAG CTCGCCTCCA CCCACCCCGA CTGCGCGCGC
CTGGTGGTGC TGCGCCCGGA GGACCTCGCG GCGTGGACCA GCCGGTGGGA GGCCGACGAC
CTGCTGCTCT CCACTGCGGG CCCCGGCGAG GTGACCGCCC GGGTGCGGGT GGCCGGCCAG
CGGGCCGCCG CCCGGCGCGG GGCGGCCGCC GGGCAGCGCG CAGGCGAGGG CCTCACGTCC
GGCAGCGGAG AGGGCCGCAG CGATGCGGGG GCCGCCGGCC CGGGTGCGGC ACCCCCCGGG
GAGGGTGACA GCATCGACCT CGGTGGGCTG GTGATCCACC GGGACAGCTG GTCGGCCCGC
CTCCGGGGGC GCACGCTGGA CCTGACCTTC CGCGAGTTCG AGCTGCTGGC GCACCTCGCG
ACCCACCCGG GCCGGGTCTT CACCCGCGAG GAGCTCCTCG AGGACCTGTG GGAGGGCACC
CGGTTGAGCG GCACGCGGAC GGTGGACGTC CACGTGCGGC GCCTGCGCTC GAAGCTGGGC
CCCGAGCACG AGGGGCTGAT CGTCACCGTG CGCAACGTGG GCTACCGGAT GGAGGCGCGT
GCCTGA
 
Protein sequence
MPRVVLLHRG PAPALDSPAL EAMALLDWTV EPMGVGPGPA QPPRSPGEPP PVLVVDARDQ 
LAAHRDLARE LASTHPDCAR LVVLRPEDLA AWTSRWEADD LLLSTAGPGE VTARVRVAGQ
RAAARRGAAA GQRAGEGLTS GSGEGRSDAG AAGPGAAPPG EGDSIDLGGL VIHRDSWSAR
LRGRTLDLTF REFELLAHLA THPGRVFTRE ELLEDLWEGT RLSGTRTVDV HVRRLRSKLG
PEHEGLIVTV RNVGYRMEAR A