More than 300 homologs were found in PanDaTox collection
for query gene Ksed_03550 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 		 261 aa  503  1e-141  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  47.22 
 
 		 253 aa  176  5e-43  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  47.39 
 
 		 255 aa  174  1.9999999999999998e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  49.28 
 
 		 237 aa  166  2.9999999999999998e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  42.37 
 
 		 259 aa  165  5.9999999999999996e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  43.31 
 
 		 250 aa  164  2.0000000000000002e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  42.25 
 
 		 237 aa  161  8.000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  48.54 
 
 		 261 aa  160  2e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  46.51 
 
 		 249 aa  159  4e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  45.45 
 
 		 264 aa  159  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  43.93 
 
 		 255 aa  157  2e-37  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  42.92 
 
 		 239 aa  157  2e-37  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  44.44 
 
 		 240 aa  156  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  40.83 
 
 		 251 aa  155  4e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  39.92 
 
 		 232 aa  155  5.0000000000000005e-37  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  38.76 
 
 		 232 aa  155  5.0000000000000005e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  44.17 
 
 		 257 aa  155  6e-37  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  45.85 
 
 		 278 aa  155  7e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  45.89 
 
 		 243 aa  154  1e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  45.85 
 
 		 257 aa  154  2e-36  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  45.85 
 
 		 257 aa  154  2e-36  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  45.85 
 
 		 267 aa  154  2e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  45.85 
 
 		 257 aa  154  2e-36  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  43.54 
 
 		 232 aa  153  2.9999999999999998e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.29 
 
 		 256 aa  152  4e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.96 
 
 		 249 aa  151  8e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  41.7 
 
 		 247 aa  150  2e-35  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  41.31 
 
 		 250 aa  149  4e-35  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  42.02 
 
 		 243 aa  149  4e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  40.55 
 
 		 241 aa  147  1.0000000000000001e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  41.06 
 
 		 248 aa  145  9e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  41.04 
 
 		 239 aa  145  9e-34  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  40.38 
 
 		 236 aa  140  3e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  40.58 
 
 		 266 aa  139  3e-32  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  39.53 
 
 		 270 aa  137  1e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  31.42 
 
 		 296 aa  127  1.0000000000000001e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  34.87 
 
 		 258 aa  115  5e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  54.46 
 
 		 217 aa  103  3e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  50.52 
 
 		 238 aa  100  2e-20  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  40 
 
 		 252 aa  99  6e-20  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  51.04 
 
 		 224 aa  97.4  2e-19  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  50.53 
 
 		 236 aa  96.3  4e-19  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  38.27 
 
 		 229 aa  95.1  1e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_002936  DET1126  transcriptional regulator  48.11 
 
 		 223 aa  92.4  6e-18  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  49.06 
 
 		 223 aa  92.8  6e-18  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1501  response regulator  47.71 
 
 		 206 aa  92  7e-18  Thermobifida fusca YX  Bacteria  normal  0.117784  n/a   
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  42.71 
 
 		 229 aa  92  8e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  42.86 
 
 		 227 aa  90.9  2e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  46.67 
 
 		 235 aa  90.1  3e-17  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  38.27 
 
 		 237 aa  90.1  3e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_2331  putative winged helix family two component transcriptional regulator  51.02 
 
 		 166 aa  89.7  4e-17  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.836335 
 
 
-
 
NC_013501  Rmar_0993  two component transcriptional regulator, winged helix family  47.42 
 
 		 237 aa  89.7  5e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  46.67 
 
 		 235 aa  89  7e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  47.52 
 
 		 223 aa  89  8e-17  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_005957  BT9727_5147  response regulator  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  46.67 
 
 		 235 aa  88.6  9e-17  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  41.28 
 
 		 233 aa  87.8  1e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  48 
 
 		 236 aa  87.4  2e-16  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  45.71 
 
 		 235 aa  87.4  2e-16  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  38.04 
 
 		 235 aa  87.4  2e-16  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  38.41 
 
 		 232 aa  86.7  4e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  43.81 
 
 		 235 aa  85.5  8e-16  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  50 
 
 		 223 aa  85.1  9e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  49 
 
 		 231 aa  84.7  0.000000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  46.49 
 
 		 236 aa  85.1  0.000000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  45.19 
 
 		 227 aa  84.7  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  35.58 
 
 		 234 aa  84.7  0.000000000000001  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  44.09 
 
 		 224 aa  85.1  0.000000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_010184  BcerKBAB4_2977  two component transcriptional regulator  44.55 
 
 		 223 aa  85.1  0.000000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0131031  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  40.37 
 
 		 233 aa  85.1  0.000000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_009616  Tmel_1824  two component transcriptional regulator  41.18 
 
 		 222 aa  85.1  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  40.37 
 
 		 233 aa  85.1  0.000000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  43.3 
 
 		 224 aa  84  0.000000000000002  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal  1 
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  45.74 
 
 		 233 aa  84  0.000000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0089  response regulator receiver protein  47.31 
 
 		 171 aa  84  0.000000000000002  Frankia sp. CcI3  Bacteria  normal  0.68554  normal  1 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  40 
 
 		 227 aa  84.3  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  46.32 
 
 		 233 aa  83.6  0.000000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00991602 
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  47.52 
 
 		 225 aa  83.6  0.000000000000003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011772  BCG9842_B2001  DNA-binding response regulator  44.55 
 
 		 225 aa  83.6  0.000000000000003  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  29.45 
 
 		 238 aa  83.6  0.000000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_009441  Fjoh_0544  two component transcriptional regulator  40.21 
 
 		 227 aa  83.6  0.000000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  32.1 
 
 		 230 aa  83.2  0.000000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  39.75 
 
 		 225 aa  83.2  0.000000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  41.23 
 
 		 235 aa  83.2  0.000000000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_007963  Csal_3253  two component transcriptional regulator  41.75 
 
 		 229 aa  82.8  0.000000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1539  two component transcriptional regulator, winged helix family  48 
 
 		 222 aa  82.4  0.000000000000006  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000287281  normal  0.103291 
 
 
-
 
NC_014210  Ndas_1389  putative two component transcriptional regulator, winged helix family  51.11 
 
 		 171 aa  82.8  0.000000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.287988  hitchhiker  0.00961108 
 
 
-
 
NC_013947  Snas_0721  two component transcriptional regulator, winged helix family  39.02 
 
 		 233 aa  82.8  0.000000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.811558  normal  1 
 
 
-
 
NC_009380  Strop_4477  response regulator receiver  48.62 
 
 		 228 aa  82.4  0.000000000000007  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.0220713 
 
 
-
 
NC_007498  Pcar_0360  two component signal transduction response regulator  32.93 
 
 		 224 aa  82  0.000000000000008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1832  two component transcriptional regulator  45.45 
 
 		 245 aa  82  0.000000000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  0.366424  normal  0.561636 
 
 
-
 
NC_003909  BCE_3272  DNA-binding response regulator  44.55 
 
 		 225 aa  81.6  0.00000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.0802882  n/a   
 
 
-
 
NC_005957  BT9727_3013  response regulator  44.55 
 
 		 225 aa  81.6  0.00000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.120143  n/a   
 
 
-
 
NC_013521  Sked_04480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.49 
 
 		 232 aa  81.6  0.00000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.226813 
 
 
-
 
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