More than 300 homologs were found in PanDaTox collection
for query gene Namu_3387 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  100 
 
 
223 aa  427  1e-119  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  69 
 
 
232 aa  299  3e-80  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  64.06 
 
 
223 aa  272  3e-72  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  63.68 
 
 
222 aa  262  4e-69  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  63.18 
 
 
226 aa  260  1e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  63.64 
 
 
224 aa  256  2e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  58.64 
 
 
224 aa  255  3e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  59.91 
 
 
225 aa  255  4e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  62.27 
 
 
236 aa  249  3e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  59.73 
 
 
226 aa  249  3e-65  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  60.63 
 
 
217 aa  248  8e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.18 
 
 
222 aa  245  3e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  58.37 
 
 
226 aa  243  9.999999999999999e-64  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  61.43 
 
 
222 aa  242  3e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  58.64 
 
 
221 aa  240  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  57.66 
 
 
230 aa  238  5.999999999999999e-62  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  58.56 
 
 
226 aa  236  2e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  57.34 
 
 
228 aa  236  2e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.82 
 
 
221 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  58.7 
 
 
244 aa  235  5.0000000000000005e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  56.95 
 
 
217 aa  234  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  53.64 
 
 
225 aa  233  1.0000000000000001e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  57.73 
 
 
221 aa  232  3e-60  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.31 
 
 
222 aa  229  2e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  56.56 
 
 
220 aa  226  2e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  56.36 
 
 
218 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  57.14 
 
 
214 aa  226  2e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  55.45 
 
 
221 aa  226  3e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.76 
 
 
223 aa  223  2e-57  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.82 
 
 
215 aa  222  4e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  58.64 
 
 
224 aa  221  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  55.71 
 
 
224 aa  221  4.9999999999999996e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  56.89 
 
 
220 aa  221  4.9999999999999996e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  58.06 
 
 
215 aa  221  9e-57  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  53.85 
 
 
219 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  58.26 
 
 
214 aa  219  3.9999999999999997e-56  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.59 
 
 
247 aa  218  6e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.87 
 
 
226 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.94 
 
 
228 aa  214  7e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.94 
 
 
261 aa  213  1.9999999999999998e-54  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  51.82 
 
 
233 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.33 
 
 
226 aa  211  5.999999999999999e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.85 
 
 
215 aa  209  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.13 
 
 
229 aa  208  4e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50.68 
 
 
220 aa  207  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.45 
 
 
221 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.36 
 
 
218 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.76 
 
 
221 aa  206  2e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  53.1 
 
 
220 aa  206  3e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  52.86 
 
 
229 aa  205  4e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  52.91 
 
 
224 aa  205  4e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.89 
 
 
218 aa  205  5e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.36 
 
 
225 aa  204  6e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53.98 
 
 
230 aa  205  6e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.93 
 
 
216 aa  204  7e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.85 
 
 
230 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  44.63 
 
 
248 aa  203  2e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  51.98 
 
 
227 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.78 
 
 
226 aa  202  3e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  55 
 
 
214 aa  202  5e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.02 
 
 
220 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.87 
 
 
226 aa  201  9.999999999999999e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.55 
 
 
219 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.42 
 
 
219 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.02 
 
 
241 aa  200  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  51.54 
 
 
227 aa  200  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.67 
 
 
234 aa  199  1.9999999999999998e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50.88 
 
 
225 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  49.78 
 
 
223 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  51.35 
 
 
222 aa  198  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.12 
 
 
239 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  56.88 
 
 
302 aa  198  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  51.82 
 
 
225 aa  197  9e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52.7 
 
 
224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  46.96 
 
 
234 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.67 
 
 
220 aa  196  2.0000000000000003e-49  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  51.82 
 
 
225 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.9 
 
 
239 aa  196  2.0000000000000003e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.22 
 
 
224 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.3 
 
 
250 aa  195  5.000000000000001e-49  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.57 
 
 
225 aa  195  6e-49  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.04 
 
 
241 aa  194  7e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  52 
 
 
223 aa  194  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  48.62 
 
 
228 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  48.86 
 
 
235 aa  194  1e-48  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52 
 
 
225 aa  194  1e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.21 
 
 
219 aa  194  1e-48  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.9 
 
 
225 aa  193  2e-48  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  51.36 
 
 
226 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  51.12 
 
 
230 aa  193  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50.91 
 
 
228 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  48.87 
 
 
217 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50 
 
 
234 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.04 
 
 
227 aa  192  4e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50.43 
 
 
231 aa  192  5e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.94 
 
 
224 aa  191  5e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  48.26 
 
 
242 aa  191  6e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  53.27 
 
 
211 aa  191  7e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  48.42 
 
 
221 aa  191  8e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
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