More than 300 homologs were found in PanDaTox collection
for query gene Cthe_0298 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  100 
 
 
600 aa  1196    Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
759 aa  553  1e-156  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
832 aa  414  1e-114  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  52.77 
 
 
623 aa  344  2.9999999999999997e-93  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  59.3 
 
 
567 aa  329  7e-89  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  52.39 
 
 
602 aa  322  9.999999999999999e-87  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  56.44 
 
 
370 aa  313  4.999999999999999e-84  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  37.27 
 
 
727 aa  303  8.000000000000001e-81  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
740 aa  289  1e-76  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
733 aa  278  2e-73  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  44.19 
 
 
744 aa  277  4e-73  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  44.96 
 
 
740 aa  274  3e-72  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
686 aa  272  1e-71  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  45.77 
 
 
779 aa  271  2e-71  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  46.98 
 
 
702 aa  271  2e-71  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  44.64 
 
 
706 aa  267  2.9999999999999995e-70  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  52.32 
 
 
516 aa  268  2.9999999999999995e-70  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  45.33 
 
 
695 aa  262  1e-68  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  47.14 
 
 
740 aa  259  1e-67  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
1500 aa  256  7e-67  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
868 aa  254  2.0000000000000002e-66  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  37.06 
 
 
962 aa  251  2e-65  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  39.48 
 
 
823 aa  251  3e-65  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
772 aa  244  3e-63  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
685 aa  241  4e-62  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
735 aa  240  4e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
735 aa  239  1e-61  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  39.45 
 
 
678 aa  238  2e-61  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
780 aa  236  6e-61  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
908 aa  237  6e-61  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1632  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
654 aa  236  1.0000000000000001e-60  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
905 aa  236  1.0000000000000001e-60  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
905 aa  235  2.0000000000000002e-60  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  50.16 
 
 
676 aa  234  5e-60  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_007493  RSP_0044  putative cytoplasmic chemoreceptor, TlpT  36.14 
 
 
567 aa  233  6e-60  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0134213  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  36.79 
 
 
1048 aa  233  7.000000000000001e-60  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  36.56 
 
 
1049 aa  233  8.000000000000001e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1679  methyl-accepting chemotaxis sensory transducer  36.14 
 
 
567 aa  233  9e-60  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00756362  hitchhiker  0.00632021 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.2 
 
 
954 aa  232  1e-59  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
969 aa  231  4e-59  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
780 aa  230  7e-59  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  44.22 
 
 
706 aa  227  4e-58  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
843 aa  226  8e-58  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  39.36 
 
 
767 aa  226  8e-58  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3278  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
880 aa  226  8e-58  Anaeromyxobacter sp. K  Bacteria  normal  0.0350486  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
815 aa  224  3e-57  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  39.07 
 
 
723 aa  223  6e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  30.53 
 
 
745 aa  222  9.999999999999999e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_010001  Cphy_1172  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
562 aa  222  9.999999999999999e-57  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000023446  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.55 
 
 
1123 aa  221  3e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  43.04 
 
 
741 aa  221  3.9999999999999997e-56  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.26 
 
 
863 aa  221  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  36.21 
 
 
774 aa  220  5e-56  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  37.09 
 
 
860 aa  220  5e-56  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  30.47 
 
 
705 aa  218  2.9999999999999998e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.71 
 
 
720 aa  216  7e-55  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
793 aa  216  7e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  30.46 
 
 
752 aa  216  9e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.46 
 
 
864 aa  216  9.999999999999999e-55  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  31.06 
 
 
753 aa  216  9.999999999999999e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
610 aa  214  2.9999999999999995e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
707 aa  214  4.9999999999999996e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
941 aa  211  2e-53  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
601 aa  211  2e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  29.35 
 
 
712 aa  211  2e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3162  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
569 aa  211  3e-53  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  29.78 
 
 
733 aa  211  3e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.97 
 
 
701 aa  211  4e-53  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.24 
 
 
1170 aa  210  5e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
617 aa  211  5e-53  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  36.47 
 
 
797 aa  210  7e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010001  Cphy_0285  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
711 aa  209  1e-52  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
556 aa  209  2e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
621 aa  209  2e-52  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
585 aa  208  2e-52  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010001  Cphy_1053  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
418 aa  207  4e-52  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000193482  n/a   
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
555 aa  207  4e-52  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
556 aa  207  6e-52  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_007520  Tcr_1394  methyl-accepting chemotaxis sensory transducer  27.52 
 
 
840 aa  206  7e-52  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  39.19 
 
 
622 aa  206  7e-52  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
661 aa  206  8e-52  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
608 aa  206  8e-52  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_012917  PC1_0113  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
559 aa  205  2e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4524  methyl-accepting chemotaxis sensory transducer  40.47 
 
 
599 aa  205  2e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
565 aa  205  2e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  37.24 
 
 
775 aa  205  2e-51  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  30.7 
 
 
740 aa  205  2e-51  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
755 aa  204  3e-51  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
589 aa  204  3e-51  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
578 aa  204  4e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
727 aa  204  4e-51  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  38.95 
 
 
654 aa  203  8e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
556 aa  203  8e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
597 aa  203  8e-51  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
664 aa  203  9e-51  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
579 aa  202  9.999999999999999e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.11 
 
 
665 aa  202  9.999999999999999e-51  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
669 aa  202  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
573 aa  202  9.999999999999999e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
657 aa  202  9.999999999999999e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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