More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1053 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1053  methyl-accepting chemotaxis sensory transducer  100 
 
 
418 aa  822    Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000193482  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
600 aa  207  2e-52  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_010001  Cphy_0285  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
711 aa  204  2e-51  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1172  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
562 aa  200  3.9999999999999996e-50  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000023446  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
759 aa  189  5.999999999999999e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  34 
 
 
832 aa  173  3.9999999999999995e-42  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
602 aa  168  2e-40  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  34.49 
 
 
623 aa  164  4.0000000000000004e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  36.19 
 
 
945 aa  163  5.0000000000000005e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
567 aa  161  2e-38  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  31.64 
 
 
695 aa  159  8e-38  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  39.73 
 
 
370 aa  157  2e-37  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  29.98 
 
 
792 aa  157  5.0000000000000005e-37  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  32.21 
 
 
740 aa  156  7e-37  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  32.83 
 
 
654 aa  154  2.9999999999999998e-36  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  34.92 
 
 
516 aa  153  5.9999999999999996e-36  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  35.49 
 
 
586 aa  152  1e-35  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  31.9 
 
 
744 aa  152  1e-35  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  28.78 
 
 
677 aa  151  2e-35  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.84 
 
 
515 aa  150  4e-35  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
594 aa  150  5e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
515 aa  150  5e-35  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
597 aa  149  7e-35  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
656 aa  149  9e-35  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_007963  Csal_0033  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
593 aa  149  1.0000000000000001e-34  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.684678  n/a   
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
657 aa  149  1.0000000000000001e-34  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
656 aa  149  1.0000000000000001e-34  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
706 aa  147  2.0000000000000003e-34  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  31.81 
 
 
676 aa  147  3e-34  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  33.56 
 
 
622 aa  147  3e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1117  methyl-accepting chemotaxis protein  30.75 
 
 
657 aa  147  4.0000000000000006e-34  Agrobacterium vitis S4  Bacteria  normal  0.593573  n/a   
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  29.98 
 
 
604 aa  147  4.0000000000000006e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.45 
 
 
551 aa  147  5e-34  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
647 aa  146  6e-34  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
572 aa  146  7.0000000000000006e-34  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  32.82 
 
 
706 aa  146  7.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  36.88 
 
 
559 aa  145  1e-33  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  26.91 
 
 
394 aa  144  2e-33  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
664 aa  144  2e-33  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  33.44 
 
 
679 aa  145  2e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.44 
 
 
665 aa  145  2e-33  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
664 aa  144  2e-33  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
657 aa  144  2e-33  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
544 aa  144  2e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  28.8 
 
 
782 aa  144  2e-33  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  33.77 
 
 
515 aa  144  3e-33  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_012848  Rleg_5092  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
626 aa  144  3e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.359668  normal  0.0114189 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  33.94 
 
 
546 aa  144  3e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  34.32 
 
 
526 aa  144  4e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  34.32 
 
 
546 aa  144  4e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  34.32 
 
 
546 aa  144  4e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  34.32 
 
 
546 aa  144  4e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
617 aa  144  4e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  29.53 
 
 
797 aa  144  4e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  34.32 
 
 
546 aa  144  4e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  33.11 
 
 
679 aa  144  4e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
598 aa  144  4e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  34.32 
 
 
511 aa  143  5e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
615 aa  143  5e-33  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_011368  Rleg2_5372  methyl-accepting chemotaxis sensory transducer  29.34 
 
 
627 aa  143  5e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.756404 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
615 aa  143  5e-33  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  33.97 
 
 
556 aa  143  6e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  31.39 
 
 
740 aa  143  6e-33  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
611 aa  143  6e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  34.22 
 
 
512 aa  142  7e-33  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010002  Daci_4524  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
599 aa  142  9e-33  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  30.85 
 
 
779 aa  142  9.999999999999999e-33  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  30.18 
 
 
793 aa  142  9.999999999999999e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
522 aa  142  9.999999999999999e-33  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
618 aa  142  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
522 aa  142  9.999999999999999e-33  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
585 aa  142  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  34.01 
 
 
524 aa  141  1.9999999999999998e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_011989  Avi_0452  methyl-accepting chemotaxis protein  28.57 
 
 
622 aa  141  1.9999999999999998e-32  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.93 
 
 
888 aa  141  1.9999999999999998e-32  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  38.05 
 
 
608 aa  140  3e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
521 aa  141  3e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4292  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
535 aa  140  3e-32  Caulobacter sp. K31  Bacteria  normal  normal  0.432431 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  34.69 
 
 
513 aa  140  3e-32  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  32.99 
 
 
600 aa  140  3.9999999999999997e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.02 
 
 
601 aa  140  3.9999999999999997e-32  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.9 
 
 
566 aa  140  3.9999999999999997e-32  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_011989  Avi_2608  methyl-accepting chemotaxis protein  30.05 
 
 
655 aa  140  3.9999999999999997e-32  Agrobacterium vitis S4  Bacteria  normal  0.445883  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
545 aa  140  3.9999999999999997e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
521 aa  140  3.9999999999999997e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
545 aa  140  3.9999999999999997e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
627 aa  140  6e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  32.75 
 
 
733 aa  140  6e-32  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
566 aa  139  7e-32  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  32.53 
 
 
533 aa  139  7e-32  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
583 aa  139  7.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_007973  Rmet_0160  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
513 aa  139  7.999999999999999e-32  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
648 aa  139  7.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  35.83 
 
 
617 aa  139  8.999999999999999e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  28.04 
 
 
698 aa  139  1e-31  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
567 aa  139  1e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
555 aa  139  1e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
577 aa  139  1e-31  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  27.61 
 
 
551 aa  139  1e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
615 aa  139  1e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
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