More than 300 homologs were found in PanDaTox collection
for query gene Amir_6349 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  100 
 
 
410 aa  808    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  55.16 
 
 
514 aa  332  6e-90  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  45.89 
 
 
567 aa  311  1e-83  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  47.21 
 
 
732 aa  306  4.0000000000000004e-82  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  47.43 
 
 
522 aa  304  1.0000000000000001e-81  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  53.35 
 
 
676 aa  300  2e-80  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  47.9 
 
 
517 aa  281  1e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  47.26 
 
 
490 aa  278  1e-73  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  47.26 
 
 
490 aa  278  1e-73  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  47.26 
 
 
490 aa  278  1e-73  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  44.35 
 
 
493 aa  272  8.000000000000001e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  44.94 
 
 
493 aa  270  4e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  45.79 
 
 
497 aa  266  4e-70  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  41.18 
 
 
496 aa  257  3e-67  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  44.57 
 
 
538 aa  252  8.000000000000001e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  42.47 
 
 
512 aa  249  4e-65  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  37.8 
 
 
414 aa  244  3e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  42.65 
 
 
521 aa  224  3e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  37.7 
 
 
547 aa  208  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  43.3 
 
 
382 aa  202  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  34.49 
 
 
664 aa  197  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  38.84 
 
 
491 aa  182  1e-44  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  32.58 
 
 
509 aa  177  4e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  32.66 
 
 
497 aa  173  3.9999999999999995e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  37.58 
 
 
340 aa  172  1e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37.33 
 
 
390 aa  169  1e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  34.59 
 
 
420 aa  166  5e-40  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  33.97 
 
 
505 aa  163  5.0000000000000005e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  34.2 
 
 
414 aa  161  2e-38  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  34.06 
 
 
512 aa  160  3e-38  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  33.87 
 
 
560 aa  160  4e-38  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  33.83 
 
 
320 aa  152  8e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  33.96 
 
 
504 aa  151  2e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  36.91 
 
 
336 aa  150  5e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  33.43 
 
 
549 aa  149  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.83 
 
 
468 aa  146  7.0000000000000006e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  35.99 
 
 
311 aa  145  1e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  35.99 
 
 
311 aa  145  1e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  31.53 
 
 
625 aa  145  2e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  34.05 
 
 
573 aa  144  3e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  35.67 
 
 
311 aa  144  4e-33  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  33.56 
 
 
307 aa  142  9.999999999999999e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  30.81 
 
 
486 aa  142  9.999999999999999e-33  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  33.74 
 
 
463 aa  141  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  32.11 
 
 
520 aa  141  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.37 
 
 
400 aa  141  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  33.33 
 
 
326 aa  140  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
394 aa  140  4.999999999999999e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  35.86 
 
 
481 aa  139  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  33.04 
 
 
545 aa  137  3.0000000000000003e-31  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  37.45 
 
 
352 aa  137  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  34.53 
 
 
404 aa  136  5e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  32.15 
 
 
393 aa  135  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  34.5 
 
 
409 aa  135  9.999999999999999e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  33.87 
 
 
424 aa  135  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  33.95 
 
 
395 aa  133  6e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_09620  cell envelope-related function transcriptional attenuator common domain protein  36.7 
 
 
353 aa  132  1.0000000000000001e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.369888 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  27.94 
 
 
382 aa  131  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  33.58 
 
 
481 aa  131  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  31.97 
 
 
362 aa  131  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  30.72 
 
 
618 aa  130  3e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  31.04 
 
 
619 aa  130  6e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  27.68 
 
 
453 aa  129  9.000000000000001e-29  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  31.19 
 
 
407 aa  128  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.41 
 
 
530 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.48 
 
 
734 aa  127  4.0000000000000003e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  32.49 
 
 
466 aa  127  5e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  30.84 
 
 
526 aa  125  1e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  32.7 
 
 
468 aa  125  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  32.71 
 
 
363 aa  124  3e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  30.36 
 
 
379 aa  124  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  32.28 
 
 
303 aa  124  4e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  30.57 
 
 
487 aa  124  4e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  30.24 
 
 
478 aa  122  9e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  31.51 
 
 
417 aa  122  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.29 
 
 
516 aa  122  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  31.71 
 
 
374 aa  121  1.9999999999999998e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  31.8 
 
 
434 aa  121  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  31.68 
 
 
306 aa  120  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  31.21 
 
 
434 aa  120  4.9999999999999996e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  31.65 
 
 
377 aa  120  6e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  29.68 
 
 
506 aa  120  6e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  31.63 
 
 
520 aa  119  7.999999999999999e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  30.74 
 
 
540 aa  118  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  29.14 
 
 
480 aa  118  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  33.08 
 
 
307 aa  117  3e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  30.8 
 
 
521 aa  117  3.9999999999999997e-25  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  30.55 
 
 
643 aa  116  6e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  31.56 
 
 
499 aa  115  1.0000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  30.57 
 
 
349 aa  115  2.0000000000000002e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  28.57 
 
 
381 aa  114  3e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  27.14 
 
 
395 aa  113  6e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.37 
 
 
406 aa  111  2.0000000000000002e-23  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  29.61 
 
 
684 aa  112  2.0000000000000002e-23  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  28.16 
 
 
432 aa  110  5e-23  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  29.39 
 
 
352 aa  110  7.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  30.56 
 
 
508 aa  109  1e-22  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.5 
 
 
699 aa  108  2e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  28.15 
 
 
296 aa  108  2e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.5 
 
 
699 aa  108  2e-22  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
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