More than 300 homologs were found in PanDaTox collection
for query gene Sros_6548 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_6548  ABC-type sugar transport system periplasmic component-like protein  100 
 
 
490 aa  987    Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.000225542 
 
 
-
 
NC_010001  Cphy_1013  extracellular solute-binding protein  23.08 
 
 
494 aa  99  2e-19  Clostridium phytofermentans ISDg  Bacteria  normal  0.984819  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  28.06 
 
 
415 aa  94.4  5e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  24.68 
 
 
414 aa  86.7  8e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_008578  Acel_0434  extracellular solute-binding protein  26.2 
 
 
452 aa  83.2  0.00000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.396307 
 
 
-
 
NC_011898  Ccel_3246  extracellular solute-binding protein family 1  26.9 
 
 
443 aa  79.7  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  26.28 
 
 
426 aa  79.7  0.0000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  25.89 
 
 
444 aa  78.6  0.0000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  27.64 
 
 
411 aa  79  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.4  0.0000000000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.4  0.0000000000005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_012892  B21_03255  hypothetical protein  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.8  0.0000000000005  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  29.6 
 
 
438 aa  77.4  0.0000000000006  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.36 
 
 
422 aa  76.6  0.0000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  32.1 
 
 
427 aa  76.6  0.0000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_013526  Tter_2303  extracellular solute-binding protein family 1  26.01 
 
 
480 aa  76.6  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.316955  n/a   
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  28.83 
 
 
441 aa  76.3  0.000000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  76.6  0.000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  75.5  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  75.5  0.000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  75.5  0.000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  75.5  0.000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  75.5  0.000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  30.27 
 
 
444 aa  75.1  0.000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  25.32 
 
 
439 aa  74.7  0.000000000003  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  30.82 
 
 
425 aa  74.3  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  28.72 
 
 
441 aa  74.3  0.000000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  26.6 
 
 
444 aa  73.6  0.000000000007  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  25.54 
 
 
438 aa  72.8  0.00000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3534  extracellular solute-binding protein family 1  24.9 
 
 
445 aa  72.8  0.00000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.582574 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  25.54 
 
 
438 aa  72.8  0.00000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
438 aa  72.8  0.00000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1215  extracellular solute-binding protein family 1  29.25 
 
 
446 aa  72.8  0.00000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.0000064062  n/a   
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  25.54 
 
 
438 aa  72.8  0.00000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2055  extracellular solute-binding protein  25.75 
 
 
436 aa  72.4  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.822621  normal 
 
 
-
 
NC_010676  Bphyt_4586  extracellular solute-binding protein family 1  26.04 
 
 
417 aa  72  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.947174 
 
 
-
 
NC_010483  TRQ2_0512  extracellular solute-binding protein  32.92 
 
 
423 aa  71.2  0.00000000003  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00024476  n/a   
 
 
-
 
NC_011899  Hore_20520  extracellular solute-binding protein family 1  22.69 
 
 
417 aa  71.2  0.00000000003  Halothermothrix orenii H 168  Bacteria  normal  0.561553  n/a   
 
 
-
 
NC_009436  Ent638_3856  glycerol-3-phosphate transporter periplasmic binding protein  25.75 
 
 
440 aa  71.6  0.00000000003  Enterobacter sp. 638  Bacteria  normal  normal  0.64819 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  25.27 
 
 
438 aa  71.2  0.00000000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  27.52 
 
 
444 aa  71.2  0.00000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1264  glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide  26.57 
 
 
438 aa  70.9  0.00000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.400828  normal  0.517414 
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  27.59 
 
 
443 aa  70.9  0.00000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  28.47 
 
 
444 aa  70.9  0.00000000005  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  27.59 
 
 
443 aa  70.9  0.00000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  26.77 
 
 
427 aa  70.9  0.00000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  27.59 
 
 
444 aa  70.9  0.00000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  26.34 
 
 
424 aa  70.5  0.00000000006  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  28.47 
 
 
444 aa  70.5  0.00000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  28.12 
 
 
444 aa  70.5  0.00000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.4 
 
 
411 aa  70.1  0.00000000008  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013595  Sros_4889  ABC-type sugar transport system periplasmic component-like protein  26.85 
 
 
429 aa  69.3  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.278868  normal  0.377169 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  26.94 
 
 
439 aa  69.3  0.0000000001  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  30.94 
 
 
420 aa  69.3  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_007347  Reut_A2052  extracellular solute-binding protein  25.9 
 
 
438 aa  69.3  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  30.52 
 
 
419 aa  69.3  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_010557  BamMC406_6024  extracellular solute-binding protein  30.32 
 
 
412 aa  68.6  0.0000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1185  extracellular solute-binding protein family 1  26.07 
 
 
438 aa  67.8  0.0000000004  Ralstonia pickettii 12D  Bacteria  normal  0.276437  normal 
 
 
-
 
NC_008392  Bamb_6324  extracellular solute-binding protein  30.32 
 
 
412 aa  67.8  0.0000000004  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8236  ABC-type sugar transport system periplasmic component-like protein  24.55 
 
 
434 aa  67.4  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.953199  normal  0.764848 
 
 
-
 
NC_010682  Rpic_1092  extracellular solute-binding protein family 1  26.07 
 
 
438 aa  67.4  0.0000000006  Ralstonia pickettii 12J  Bacteria  normal  0.0503452  normal 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  23.06 
 
 
437 aa  67  0.0000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  26.84 
 
 
439 aa  66.6  0.0000000009  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2016  extracellular solute-binding protein  24.87 
 
 
408 aa  66.6  0.0000000009  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00148299  normal 
 
 
-
 
NC_014212  Mesil_2391  extracellular solute-binding protein family 1  30.64 
 
 
422 aa  66.6  0.0000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  0.436445  normal 
 
 
-
 
NC_013421  Pecwa_2173  extracellular solute-binding protein family 1  26.33 
 
 
445 aa  65.9  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00822083  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  23.98 
 
 
439 aa  66.6  0.000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  23.98 
 
 
439 aa  66.6  0.000000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1091  extracellular solute-binding protein  24.77 
 
 
433 aa  66.2  0.000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3509  glycerol-3-phosphate transporter periplasmic binding protein  27.61 
 
 
441 aa  65.9  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.839022  normal  0.0272066 
 
 
-
 
NC_010086  Bmul_3196  extracellular solute-binding protein  26.37 
 
 
419 aa  66.6  0.000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.461238  normal  0.154514 
 
 
-
 
NC_013171  Apre_0061  extracellular solute-binding protein family 1  23.42 
 
 
462 aa  66.2  0.000000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  23.98 
 
 
439 aa  66.6  0.000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5487  extracellular solute-binding protein  25.79 
 
 
419 aa  65.5  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  decreased coverage  0.0000866815 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  27.61 
 
 
441 aa  65.9  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2709  glycerol-3-phosphate transporter periplasmic binding protein  25.75 
 
 
441 aa  65.9  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4880  extracellular solute-binding protein  30.32 
 
 
412 aa  65.9  0.000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  24.8 
 
 
424 aa  65.5  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  23.86 
 
 
448 aa  65.5  0.000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3285  extracellular solute-binding protein  30.32 
 
 
412 aa  65.9  0.000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0862  extracellular solute-binding protein  26.77 
 
 
437 aa  65.5  0.000000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.597127 
 
 
-
 
NC_013739  Cwoe_0237  extracellular solute-binding protein family 1  25.35 
 
 
444 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.368483 
 
 
-
 
NC_007509  Bcep18194_C6933  ABC sugar transporter, periplasmic ligand binding protein  29.11 
 
 
412 aa  65.1  0.000000003  Burkholderia sp. 383  Bacteria  hitchhiker  0.0038808  normal 
 
 
-
 
NC_011898  Ccel_2115  extracellular solute-binding protein family 1  23.08 
 
 
432 aa  65.1  0.000000003  Clostridium cellulolyticum H10  Bacteria  normal  0.845793  n/a   
 
 
-
 
NC_008391  Bamb_4932  extracellular solute-binding protein  26.29 
 
 
419 aa  65.1  0.000000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0556288 
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  27.15 
 
 
495 aa  65.1  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.09 
 
 
445 aa  65.1  0.000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2451  extracellular solute-binding protein family 1  27.43 
 
 
449 aa  64.7  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.135643  n/a   
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  24.75 
 
 
434 aa  64.3  0.000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0791  extracellular solute-binding protein family 1  26.46 
 
 
437 aa  63.9  0.000000006  Acidovorax ebreus TPSY  Bacteria  normal  0.721808  n/a   
 
 
-
 
NC_009654  Mmwyl1_0604  extracellular solute-binding protein  22.35 
 
 
433 aa  63.9  0.000000007  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00010036 
 
 
-
 
NC_008061  Bcen_5201  extracellular solute-binding protein  25.85 
 
 
420 aa  63.5  0.000000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5658  extracellular solute-binding protein  25.85 
 
 
420 aa  63.5  0.000000008  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0866592  normal  0.356633 
 
 
-
 
NC_012850  Rleg_1866  extracellular solute-binding protein family 1  29.8 
 
 
434 aa  63.5  0.000000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4577  extracellular solute-binding protein  26.37 
 
 
419 aa  63.5  0.000000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00216886 
 
 
-
 
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