More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_2713 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2713  chemotaxis protein methyltransferase CheR, putative  100 
 
 
288 aa  597  1e-170  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0583099  n/a   
 
 
-
 
NC_007005  Psyr_2446  MCP methyltransferase, CheR-type:MCP methyltransferase, CheR-type  92.47 
 
 
280 aa  541  1e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.676059  hitchhiker  0.0010522 
 
 
-
 
NC_007492  Pfl01_2647  MCP methyltransferase, CheR-type  85.19 
 
 
277 aa  492  9.999999999999999e-139  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.688785 
 
 
-
 
NC_010322  PputGB1_2143  MCP methyltransferase, CheR-type  80.51 
 
 
273 aa  466  9.999999999999999e-131  Pseudomonas putida GB-1  Bacteria  normal  0.255114  hitchhiker  0.000601426 
 
 
-
 
NC_010501  PputW619_2107  MCP methyltransferase, CheR-type  80.67 
 
 
273 aa  465  9.999999999999999e-131  Pseudomonas putida W619  Bacteria  normal  0.314277  normal 
 
 
-
 
NC_002947  PP_3760  MCP methyltransferase, CheR-type  79.78 
 
 
273 aa  461  1e-129  Pseudomonas putida KT2440  Bacteria  normal  normal  0.711801 
 
 
-
 
NC_009512  Pput_2003  MCP methyltransferase, CheR-type  80.15 
 
 
273 aa  463  1e-129  Pseudomonas putida F1  Bacteria  normal  normal  0.0541882 
 
 
-
 
NC_009439  Pmen_0170  MCP methyltransferase, CheR-type  77.07 
 
 
269 aa  439  9.999999999999999e-123  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1072  MCP methyltransferase, CheR-type  73.03 
 
 
303 aa  417  1e-116  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0475353  normal  0.619503 
 
 
-
 
NC_007947  Mfla_2588  MCP methyltransferase, CheR-type  70.79 
 
 
286 aa  414  9.999999999999999e-116  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.798515 
 
 
-
 
NC_012791  Vapar_2804  MCP methyltransferase, CheR-type  69.66 
 
 
284 aa  400  9.999999999999999e-111  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3830  MCP methyltransferase, CheR-type  62.45 
 
 
279 aa  358  5e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.109211  normal  0.0246625 
 
 
-
 
NC_008752  Aave_3995  MCP methyltransferase, CheR-type  59.11 
 
 
285 aa  346  3e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.318486  normal 
 
 
-
 
NC_008782  Ajs_0648  MCP methyltransferase, CheR-type  57.72 
 
 
277 aa  346  3e-94  Acidovorax sp. JS42  Bacteria  normal  0.0687034  normal  0.715358 
 
 
-
 
NC_011992  Dtpsy_0627  MCP methyltransferase, CheR-type  57.35 
 
 
277 aa  345  7e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.481444  n/a   
 
 
-
 
NC_011984  Avi_9100  chemotaxis methyltransferase  60 
 
 
277 aa  344  1e-93  Agrobacterium vitis S4  Bacteria  normal  0.437866  n/a   
 
 
-
 
NC_010623  Bphy_4209  MCP methyltransferase, CheR-type  58.27 
 
 
282 aa  327  1.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009670  Oant_4783  MCP methyltransferase CheR-type  55.39 
 
 
279 aa  327  1.0000000000000001e-88  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1738  MCP methyltransferase, CheR-type  56.23 
 
 
274 aa  325  4.0000000000000003e-88  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.123373 
 
 
-
 
NC_010676  Bphyt_5389  MCP methyltransferase, CheR-type  56.02 
 
 
281 aa  323  3e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.087353 
 
 
-
 
NC_013216  Dtox_3785  MCP methyltransferase, CheR-type  53.36 
 
 
298 aa  320  9.999999999999999e-87  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1943  MCP methyltransferase, CheR-type  56.82 
 
 
286 aa  318  7.999999999999999e-86  Chelativorans sp. BNC1  Bacteria  normal  0.125019  n/a   
 
 
-
 
NC_007952  Bxe_B1217  MCP methyltransferase, CheR-type  55.64 
 
 
281 aa  315  4e-85  Burkholderia xenovorans LB400  Bacteria  normal  0.702972  normal  0.558808 
 
 
-
 
NC_009507  Swit_5354  MCP methyltransferase, CheR-type  55.09 
 
 
274 aa  311  1e-83  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.510015 
 
 
-
 
NC_010506  Swoo_1962  MCP methyltransferase, CheR-type  51.84 
 
 
279 aa  291  9e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0162659  normal  0.0775956 
 
 
-
 
NC_007413  Ava_4781  MCP methyltransferase, CheR-type  51.7 
 
 
276 aa  289  5.0000000000000004e-77  Anabaena variabilis ATCC 29413  Bacteria  normal  0.735388  normal 
 
 
-
 
NC_008255  CHU_2079  MCP methyltransferase, CheR-type  49.43 
 
 
280 aa  287  1e-76  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.166097 
 
 
-
 
NC_013173  Dbac_0021  MCP methyltransferase, CheR-type  51.7 
 
 
277 aa  283  2.0000000000000002e-75  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3720  CheR-type protein glutamate methyltransferase  50.57 
 
 
281 aa  280  3e-74  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1268  MCP methyltransferase, CheR-type  50 
 
 
269 aa  278  5e-74  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2258  MCP methyltransferase, CheR-type  48.08 
 
 
273 aa  268  8e-71  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.232236  normal 
 
 
-
 
NC_009831  Ssed_1647  protein-glutamate O-methyltransferase  50.19 
 
 
279 aa  266  2.9999999999999995e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  0.957871  normal 
 
 
-
 
NC_005957  BT9727_0916  chemotaxis protein methyltransferase  45.45 
 
 
285 aa  264  2e-69  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00177728  n/a   
 
 
-
 
NC_011772  BCG9842_B4267  methyltransferase, CheR family  44.73 
 
 
285 aa  263  2e-69  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00109599 
 
 
-
 
NC_010184  BcerKBAB4_0906  MCP methyltransferase, CheR-type  44.73 
 
 
285 aa  263  2e-69  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3008  MCP methyltransferase, CheR-type  45.74 
 
 
284 aa  263  3e-69  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.47371  normal 
 
 
-
 
NC_011725  BCB4264_A1036  methyltransferase, CheR family  44.36 
 
 
285 aa  262  4.999999999999999e-69  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1162  methyltransferase, CheR family  45.09 
 
 
285 aa  261  8e-69  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1071  methyltransferase, CheR family  45.09 
 
 
285 aa  261  1e-68  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.29745e-42 
 
 
-
 
NC_003909  BCE_1089  CheR family methyltransferase  44.73 
 
 
285 aa  259  2e-68  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0931  CheR family methyltransferase  44.73 
 
 
285 aa  259  3e-68  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0899  chemotaxis protein methyltransferase  44.73 
 
 
285 aa  259  3e-68  Bacillus cereus E33L  Bacteria  normal  0.391368  n/a   
 
 
-
 
NC_007530  GBAA_0995  CheR family methyltransferase  44.73 
 
 
285 aa  259  3e-68  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1030  MCP methyltransferase, CheR-type  47.91 
 
 
275 aa  255  7e-67  Spirosoma linguale DSM 74  Bacteria  normal  0.206516  normal 
 
 
-
 
NC_013037  Dfer_0391  MCP methyltransferase, CheR-type  46.79 
 
 
269 aa  252  4.0000000000000004e-66  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.329659 
 
 
-
 
NC_007517  Gmet_2641  MCP methyltransferase, CheR-type  45.96 
 
 
280 aa  248  8e-65  Geobacter metallireducens GS-15  Bacteria  normal  0.0696969  normal  0.649849 
 
 
-
 
NC_013132  Cpin_3336  MCP methyltransferase, CheR-type  50.4 
 
 
277 aa  247  1e-64  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00537558 
 
 
-
 
NC_013061  Phep_4246  Protein-glutamate O-methyltransferase  46.18 
 
 
274 aa  248  1e-64  Pedobacter heparinus DSM 2366  Bacteria  normal  0.127197  normal 
 
 
-
 
NC_009441  Fjoh_3352  protein-glutamate O-methyltransferase  44.53 
 
 
269 aa  243  3e-63  Flavobacterium johnsoniae UW101  Bacteria  normal  0.110859  n/a   
 
 
-
 
NC_013440  Hoch_2077  MCP methyltransferase, CheR-type  45.31 
 
 
277 aa  236  4e-61  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1033  MCP methyltransferase, CheR-type  43.61 
 
 
269 aa  230  2e-59  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0541  protein-glutamate O-methyltransferase  45.83 
 
 
278 aa  222  4.9999999999999996e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.126293  normal 
 
 
-
 
NC_013061  Phep_0586  Protein-glutamate O-methyltransferase  43.02 
 
 
274 aa  221  9.999999999999999e-57  Pedobacter heparinus DSM 2366  Bacteria  normal  0.364538  normal 
 
 
-
 
NC_009338  Mflv_1001  protein-glutamate O-methyltransferase  46.91 
 
 
275 aa  215  5.9999999999999996e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1134  MCP methyltransferase, CheR-type  41.06 
 
 
271 aa  215  5.9999999999999996e-55  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0014664  normal  0.105937 
 
 
-
 
NC_008576  Mmc1_2113  MCP methyltransferase, CheR-type  39.08 
 
 
565 aa  191  2e-47  Magnetococcus sp. MC-1  Bacteria  normal  0.982588  normal 
 
 
-
 
NC_009012  Cthe_0288  MCP methyltransferase, CheR-type  34.38 
 
 
369 aa  176  4e-43  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.891674  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  36.4 
 
 
1010 aa  143  3e-33  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  32.27 
 
 
980 aa  134  9.999999999999999e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  33.94 
 
 
1348 aa  133  3.9999999999999996e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  32.68 
 
 
1218 aa  132  7.999999999999999e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_013385  Adeg_2021  MCP methyltransferase, CheR-type  34.18 
 
 
256 aa  130  3e-29  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0809  MCP methyltransferase, CheR-type  30.28 
 
 
269 aa  129  6e-29  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  31.77 
 
 
853 aa  128  9.000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  33.08 
 
 
1408 aa  127  2.0000000000000002e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  31.66 
 
 
1453 aa  127  3e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  31.87 
 
 
993 aa  126  4.0000000000000003e-28  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  31.66 
 
 
1027 aa  125  7e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.3 
 
 
1324 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  31.27 
 
 
1006 aa  124  3e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  32.33 
 
 
1279 aa  123  4e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.33 
 
 
1061 aa  123  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  31.6 
 
 
1274 aa  121  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  32.6 
 
 
1378 aa  120  1.9999999999999998e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  30.68 
 
 
1380 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  30.94 
 
 
1008 aa  120  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_009634  Mevan_0259  protein-glutamate O-methyltransferase  32.41 
 
 
279 aa  120  1.9999999999999998e-26  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  31.85 
 
 
1242 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  33.19 
 
 
1092 aa  120  3e-26  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  33.71 
 
 
1535 aa  120  3e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  31.9 
 
 
1483 aa  120  3.9999999999999996e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  30.61 
 
 
1303 aa  120  3.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  30.8 
 
 
1344 aa  119  4.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.43 
 
 
1163 aa  119  6e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  31.95 
 
 
1306 aa  119  6e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0695  protein-glutamate O-methyltransferase  30.7 
 
 
259 aa  118  9e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2448  MCP methyltransferase, CheR-type  31.3 
 
 
258 aa  118  9.999999999999999e-26  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.000000000593357  n/a   
 
 
-
 
NC_007348  Reut_B4915  PAS  33.33 
 
 
1384 aa  118  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  31.4 
 
 
1407 aa  118  9.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  30 
 
 
1445 aa  117  1.9999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  31.87 
 
 
1248 aa  117  1.9999999999999998e-25  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_010717  PXO_03023  methyltransferase  33.73 
 
 
604 aa  117  3e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  33.62 
 
 
302 aa  116  3.9999999999999997e-25  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.95 
 
 
1063 aa  116  3.9999999999999997e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  29.15 
 
 
1404 aa  116  5e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  31.16 
 
 
837 aa  116  5e-25  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_009051  Memar_1545  protein-glutamate O-methyltransferase  34.5 
 
 
264 aa  116  5e-25  Methanoculleus marisnigri JR1  Archaea  normal  0.474689  n/a   
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  32.51 
 
 
1698 aa  116  6e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  27.43 
 
 
631 aa  115  6.9999999999999995e-25  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_009637  MmarC7_0177  protein-glutamate O-methyltransferase  29.96 
 
 
270 aa  114  1.0000000000000001e-24  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
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