More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4422 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  61.64 
 
 
1218 aa  1110    Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  33.8 
 
 
1407 aa  650    'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.14 
 
 
1000 aa  641    Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  42.56 
 
 
1160 aa  680    Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  55.79 
 
 
1404 aa  1054    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  48.07 
 
 
1361 aa  820    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  41.77 
 
 
1008 aa  669    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  49.06 
 
 
1384 aa  805    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  33.02 
 
 
1399 aa  644    Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  40.4 
 
 
1222 aa  663    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  100 
 
 
1274 aa  2621    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  44.77 
 
 
1371 aa  709    Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.74 
 
 
1138 aa  637    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  42.49 
 
 
1167 aa  680    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  38.38 
 
 
1380 aa  792    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  45.15 
 
 
1535 aa  729    Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  38.01 
 
 
1408 aa  789    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.94 
 
 
993 aa  630  1e-179  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  40.44 
 
 
980 aa  627  1e-178  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.34 
 
 
1008 aa  627  1e-178  Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  39.22 
 
 
998 aa  629  1e-178  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  32.76 
 
 
1348 aa  627  1e-178  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.97 
 
 
887 aa  625  1e-177  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  41.84 
 
 
1242 aa  613  9.999999999999999e-175  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  41.49 
 
 
1279 aa  610  1e-173  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  38.64 
 
 
877 aa  612  1e-173  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.32 
 
 
971 aa  608  9.999999999999999e-173  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  39.15 
 
 
1035 aa  605  1.0000000000000001e-171  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  39.93 
 
 
1027 aa  605  1.0000000000000001e-171  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  38.32 
 
 
868 aa  594  1e-168  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  40.43 
 
 
1233 aa  596  1e-168  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  38.34 
 
 
879 aa  593  1e-168  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  38.3 
 
 
1092 aa  579  1.0000000000000001e-163  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.97 
 
 
1483 aa  576  1.0000000000000001e-162  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  38 
 
 
840 aa  570  1e-161  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  38.14 
 
 
1006 aa  566  1e-160  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  38.02 
 
 
840 aa  557  1e-157  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  37.05 
 
 
1215 aa  551  1e-155  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.28 
 
 
852 aa  551  1e-155  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  37.53 
 
 
1045 aa  545  1e-153  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  36.69 
 
 
856 aa  543  1e-153  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.27 
 
 
1190 aa  538  1e-151  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.77 
 
 
1061 aa  540  1e-151  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  37.67 
 
 
1445 aa  534  1e-150  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.27 
 
 
1168 aa  530  1e-148  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.58 
 
 
1324 aa  527  1e-148  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  36.71 
 
 
1306 aa  528  1e-148  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.67 
 
 
1063 aa  523  1e-147  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.2 
 
 
1120 aa  522  1e-146  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  36.48 
 
 
1010 aa  519  1.0000000000000001e-145  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.06 
 
 
1163 aa  504  1e-141  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  36.1 
 
 
1149 aa  498  1e-139  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  34.76 
 
 
1499 aa  499  1e-139  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  35.62 
 
 
853 aa  499  1e-139  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  33.64 
 
 
1200 aa  494  9.999999999999999e-139  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  35.54 
 
 
1344 aa  493  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.29 
 
 
1158 aa  488  1e-136  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  32.25 
 
 
2468 aa  484  1e-135  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  33.25 
 
 
820 aa  480  1e-134  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  34.69 
 
 
1453 aa  478  1e-133  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  34.99 
 
 
1170 aa  478  1e-133  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  34.99 
 
 
1170 aa  478  1e-133  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  33.49 
 
 
1337 aa  475  1e-132  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  34.6 
 
 
1303 aa  472  1.0000000000000001e-131  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  33.63 
 
 
1698 aa  472  1.0000000000000001e-131  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  34.39 
 
 
1759 aa  456  1.0000000000000001e-126  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  34.15 
 
 
1535 aa  455  1.0000000000000001e-126  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  32.95 
 
 
1165 aa  448  1.0000000000000001e-124  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  33.69 
 
 
1618 aa  449  1.0000000000000001e-124  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  33.64 
 
 
1418 aa  445  1e-123  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  35.77 
 
 
1378 aa  426  1e-117  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  31.35 
 
 
1220 aa  409  1.0000000000000001e-112  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.6 
 
 
1089 aa  400  9.999999999999999e-111  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  31.12 
 
 
1214 aa  401  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  31.59 
 
 
813 aa  393  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  38.12 
 
 
639 aa  396  1e-108  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  30.46 
 
 
823 aa  389  1e-106  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  30.91 
 
 
1248 aa  386  1e-105  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  36.13 
 
 
617 aa  385  1e-105  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  40.15 
 
 
629 aa  383  1e-104  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  32.72 
 
 
824 aa  373  1e-101  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  32.38 
 
 
837 aa  367  1e-99  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  35.36 
 
 
1084 aa  348  6e-94  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  34.06 
 
 
1110 aa  346  2e-93  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  40.78 
 
 
432 aa  335  4e-90  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  35.88 
 
 
1303 aa  328  4.0000000000000003e-88  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.36 
 
 
1193 aa  317  9e-85  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  33.58 
 
 
604 aa  312  2.9999999999999997e-83  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  27.37 
 
 
2031 aa  244  1e-62  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  30.27 
 
 
631 aa  236  3e-60  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.67 
 
 
617 aa  224  9e-57  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.11 
 
 
618 aa  207  7e-52  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_6477  multi-sensor signal transduction histidine kinase  28.6 
 
 
571 aa  202  3e-50  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0945672  normal 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  36.59 
 
 
336 aa  190  2e-46  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_011729  PCC7424_1458  GAF sensor hybrid histidine kinase  28.81 
 
 
585 aa  181  5.999999999999999e-44  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00620  two-component system sensor protein  32.7 
 
 
1131 aa  174  9e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.282271  n/a   
 
 
-
 
NC_013061  Phep_2114  ATP-binding region ATPase domain protein  37.85 
 
 
400 aa  171  9e-41  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.673781 
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  33.56 
 
 
302 aa  170  1e-40  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011831  Cagg_2683  multi-sensor signal transduction histidine kinase  42.73 
 
 
546 aa  167  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000116014 
 
 
-
 
NC_013061  Phep_3370  PAS sensor protein  37.13 
 
 
713 aa  165  5.0000000000000005e-39  Pedobacter heparinus DSM 2366  Bacteria  normal  0.277761  normal 
 
 
-
 
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