Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2355 |
Symbol | |
ID | 3961490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2591885 |
End bp | 2594911 |
Gene Length | 3027 bp |
Protein Length | 1008 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917172 |
Product | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor |
Protein accession | YP_523603 |
Protein GI | 89901132 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.71741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCC AAGACCCAAG TCCTGCCCCA ACACAAGCCG TCCCGACGCC GCCGCCCAGC AGCTTTCCTA TCGTCGGCAT CGGTGCCTCG GCCGGCGGCC TGGCCGCGAT TGAAGCGTTT TTCTCGGGTA TGCCTGCCGA TGTTGACCCC GGCATGGCCT TTGTGCTGGT GCAGCATCTG GACCCGGACC ACAAGAGCAT TCTCACTGAA CTGATCCAGC GCACCACCCG CATGCAGGTA TCCGAGGTGA AGGACGGCAT GCCGGTGCAA CCCAATTGCG TCTACATCAT TCCGCCGAAT CGCGACATGG CGTTTCTGAA CGGCACACTG CAATTGCTGG AGCCCGCCGC GCCACGCGGG CACCGCCTGC CGATTGACTT TTTGTTCCGC TCACTGGCCC TGGACCAGCA TGAGCACGCC ATTGGTATCG TGCTCTCCGG CACCGGCAGT GACGGCACGC TGGGCGTGCG CGCCATCAAA ATTGACGGCG GCATGGTCAT GGTGCAAAGC CCCGCCTCGT GCGAGTTTGA CGGTATGCCG CAAAGCGCGC TGGCCACGGG CCTGGTGGAC TATGAGCTGC CGCCGGCCGA GATGGCGCCC CAGCTGATCG CCTACGTCAC CCATGCCTTT GGCCACCCAC CCCAGTCGGC CACCGTGGCC GAGCCGCACA CCGAGAACGC GCTGAAAAAA ATATTTGTCT TGCTGCGCAG CCAGACCGGG CACGACTTTT CCCAGTACAA ACCCAACACC ATTTACCGCC GCATTGAGCG CCGCATGGCG GTGCACCAGA TCGACGGCAT TGGTGGCTAT GTCAAATACT TGCAGCAAAC GCCGGTTGAA GTGCAGGCGC TGTTCAATGA CCTGTTGATT GGCGTGACCA ATTTCTTCCG CGACCCCGAC GCCTTTGCCG TGCTGGAGTC GCAAGTGATC CCCAAGCTGT TTGAGGGCAA ACCCGCCGGC AGCGCGGTGC GCGTCTGGTG CGCCGGCTGC TCAACCGGCG AAGAGGCTTA TTCGATCGCC ATCCTGCTGC AAGAGCGACT TGAGACCCTT AAAGTCAGTT ACCGGGTGCA GGTGTTTGCC ACCGACATCG ACAGCCGCGC CATCGCCGTG GCCCGGGCCG GACTCTACCC CGGCAGCATT GCCGACGATA TCTCACCCGA GCGACTGGCC CGATTTTTCA CCGCTGAGCC CGACGGCAGC GCTTACCGCA TCCACAAGAA CATTCGTGAC CTGCTGGTGT TTTCCGAACA GGACGTGATC AAAGACCCAC CGTTTTCCAA GCTCGACCTG ATCAGTTGCC GCAATCTGCT GATCTACCTG GGCCCCGAAC TGCAAAAGAA ATTGATTTCG CTCTTCCATT ACGCTCTGCA ACCCGGTGGG GTGCTGTTTT TGGGCACCTC GGAGACGGCT GGCGAGGCCG GCGGTTTGTT TGCCGTGCTG CAGCGCAAAG CCAAGATATA CCAGCGCAAG GAGGATTTTC AAGGGGCGCA GCGCGCCGCC CTGGGCCGGT TTTTGCCACC CTTGACCGAC CAGGACATCA CACGGCCGGT TGCACCTGGC AAAGGCGCAC AGCTGCCCAA GCTGTCATTG CGCGAGCTGA CCGAGCAAAC CCTGTTGCAG CAAGTGGCCC CGGTAGCGGC GCTTGTCAAC GGCCACGGCG ACATCCTCTA CCTGCATGGG CGCACGGGCC TGTACCTGGA GCCCGCGCCG GGCGAAGCGG GTATCAACAA CATCCTGAAA ATGGCGCGTG AAGGCCTGCG CCGCGACCTG ACCACCACCC TGCACAAAGC CGCCACCAGC CGCGACACCG TGCGCGCGTC GGGTGTGCGG GTCAAGACCA ACGGCCACTT CACGCTGGTC AACCTCAGCA TTTGCCCGGT GGCGGGCGGC CCGGCGGCAG CGCTGGAGTC GCCTCTGTTT TTGGTGATGC TGGAAAAAGC ACCCGATGCC AACGCCGCTG AGTCCAAAAG CCCGCCAGCC CCCGCCACCC TGCCGGCCAT CAGCGCGGCC GGCGGCAGCG ACAAGCTGCG CTCTGACGCC AGCGCCCAGA TTGCCGAACT CAACGAAGAG CTGCAAGCCA AAGAAGAATA CCTGCACGCG GCCAATGAAG AGCTGGAAAC CACCAACGAA GAGCTCAAAT CAAGCAACGA AGAAATGCAG TCGGTCAATG AAGAGCTGCA AAGCACCAAC GAAGAACTGG AGACTTCCAA GGAAGAAATG CAGTCGATCA ACGAGGAGCT GTCCACGGTC AACACCGAGC TGCAAACCAA GGTGAGCGAT CTGTCACGCG CCAACAACGA CATGAACAAC CTGCTGGCAG GCACCGGCAT TGGCACCATT TTTGTGGACC ATGCCTTGCG CATCCTGCGC TTTACCCCGG CCGCAAGCCA GATCATCAAC CTGATTCTGA GCGACGTGGG GCGTCCGGTG GCCCACATCG TGAGCAATAT GGTGGGCTAC AACACCCTGG TGGAAGACCT GCAGGCCGTG CTCAAAACCC TGATCCCCAA AGAGGTGGAG GTGCAGACCA CCGACGCTAA GACCTACACC CTGCGCATCC TGCCCTACCG CACGCTCGAC AACGTGATTG AAGGCGCGGT GATCACTTTT GTTGAAATCA CCGAAGTCAA GCGCACGCGC GCAGCGCTGC ACAAAACCAA TGAACTGCTG CGCCTGGCGG TGGTGGTGCG CGACGCGCAT GACGCCATCA CGGTGCAGGA CCTGAGTGGA CGCATCATCG CCTGGAACCC GGGCGCGGAG CGCTTGTATG GCTGGAGCGA GCTTGAAGCA CTGCAAATGA ACGTGCGTAC CCGCATCCCC GCGGAACTGC AAGAAGAAGC CCTGGCCCAG GTACACCTGC TCAGTCAGGC GCAAACGCTG GCGCCCTACC CGACCCGGCG GCTGACCAAG GACGGCCGGG TGCTGAACGT GTTGTTGACC GCCACTGCCT TGCTCGATGA GGCGGGCCAG GTGTATGCGA TTGCCACCAC CGAACGGCCC AGCGATGACC CGGTCGCGAA AGGCTAA
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Protein sequence | MTGQDPSPAP TQAVPTPPPS SFPIVGIGAS AGGLAAIEAF FSGMPADVDP GMAFVLVQHL DPDHKSILTE LIQRTTRMQV SEVKDGMPVQ PNCVYIIPPN RDMAFLNGTL QLLEPAAPRG HRLPIDFLFR SLALDQHEHA IGIVLSGTGS DGTLGVRAIK IDGGMVMVQS PASCEFDGMP QSALATGLVD YELPPAEMAP QLIAYVTHAF GHPPQSATVA EPHTENALKK IFVLLRSQTG HDFSQYKPNT IYRRIERRMA VHQIDGIGGY VKYLQQTPVE VQALFNDLLI GVTNFFRDPD AFAVLESQVI PKLFEGKPAG SAVRVWCAGC STGEEAYSIA ILLQERLETL KVSYRVQVFA TDIDSRAIAV ARAGLYPGSI ADDISPERLA RFFTAEPDGS AYRIHKNIRD LLVFSEQDVI KDPPFSKLDL ISCRNLLIYL GPELQKKLIS LFHYALQPGG VLFLGTSETA GEAGGLFAVL QRKAKIYQRK EDFQGAQRAA LGRFLPPLTD QDITRPVAPG KGAQLPKLSL RELTEQTLLQ QVAPVAALVN GHGDILYLHG RTGLYLEPAP GEAGINNILK MAREGLRRDL TTTLHKAATS RDTVRASGVR VKTNGHFTLV NLSICPVAGG PAAALESPLF LVMLEKAPDA NAAESKSPPA PATLPAISAA GGSDKLRSDA SAQIAELNEE LQAKEEYLHA ANEELETTNE ELKSSNEEMQ SVNEELQSTN EELETSKEEM QSINEELSTV NTELQTKVSD LSRANNDMNN LLAGTGIGTI FVDHALRILR FTPAASQIIN LILSDVGRPV AHIVSNMVGY NTLVEDLQAV LKTLIPKEVE VQTTDAKTYT LRILPYRTLD NVIEGAVITF VEITEVKRTR AALHKTNELL RLAVVVRDAH DAITVQDLSG RIIAWNPGAE RLYGWSELEA LQMNVRTRIP AELQEEALAQ VHLLSQAQTL APYPTRRLTK DGRVLNVLLT ATALLDEAGQ VYAIATTERP SDDPVAKG
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