Gene Rfer_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2355 
Symbol 
ID3961490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2591885 
End bp2594911 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content62% 
IMG OID637917172 
ProductMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor 
Protein accessionYP_523603 
Protein GI89901132 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.71741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCC AAGACCCAAG TCCTGCCCCA ACACAAGCCG TCCCGACGCC GCCGCCCAGC 
AGCTTTCCTA TCGTCGGCAT CGGTGCCTCG GCCGGCGGCC TGGCCGCGAT TGAAGCGTTT
TTCTCGGGTA TGCCTGCCGA TGTTGACCCC GGCATGGCCT TTGTGCTGGT GCAGCATCTG
GACCCGGACC ACAAGAGCAT TCTCACTGAA CTGATCCAGC GCACCACCCG CATGCAGGTA
TCCGAGGTGA AGGACGGCAT GCCGGTGCAA CCCAATTGCG TCTACATCAT TCCGCCGAAT
CGCGACATGG CGTTTCTGAA CGGCACACTG CAATTGCTGG AGCCCGCCGC GCCACGCGGG
CACCGCCTGC CGATTGACTT TTTGTTCCGC TCACTGGCCC TGGACCAGCA TGAGCACGCC
ATTGGTATCG TGCTCTCCGG CACCGGCAGT GACGGCACGC TGGGCGTGCG CGCCATCAAA
ATTGACGGCG GCATGGTCAT GGTGCAAAGC CCCGCCTCGT GCGAGTTTGA CGGTATGCCG
CAAAGCGCGC TGGCCACGGG CCTGGTGGAC TATGAGCTGC CGCCGGCCGA GATGGCGCCC
CAGCTGATCG CCTACGTCAC CCATGCCTTT GGCCACCCAC CCCAGTCGGC CACCGTGGCC
GAGCCGCACA CCGAGAACGC GCTGAAAAAA ATATTTGTCT TGCTGCGCAG CCAGACCGGG
CACGACTTTT CCCAGTACAA ACCCAACACC ATTTACCGCC GCATTGAGCG CCGCATGGCG
GTGCACCAGA TCGACGGCAT TGGTGGCTAT GTCAAATACT TGCAGCAAAC GCCGGTTGAA
GTGCAGGCGC TGTTCAATGA CCTGTTGATT GGCGTGACCA ATTTCTTCCG CGACCCCGAC
GCCTTTGCCG TGCTGGAGTC GCAAGTGATC CCCAAGCTGT TTGAGGGCAA ACCCGCCGGC
AGCGCGGTGC GCGTCTGGTG CGCCGGCTGC TCAACCGGCG AAGAGGCTTA TTCGATCGCC
ATCCTGCTGC AAGAGCGACT TGAGACCCTT AAAGTCAGTT ACCGGGTGCA GGTGTTTGCC
ACCGACATCG ACAGCCGCGC CATCGCCGTG GCCCGGGCCG GACTCTACCC CGGCAGCATT
GCCGACGATA TCTCACCCGA GCGACTGGCC CGATTTTTCA CCGCTGAGCC CGACGGCAGC
GCTTACCGCA TCCACAAGAA CATTCGTGAC CTGCTGGTGT TTTCCGAACA GGACGTGATC
AAAGACCCAC CGTTTTCCAA GCTCGACCTG ATCAGTTGCC GCAATCTGCT GATCTACCTG
GGCCCCGAAC TGCAAAAGAA ATTGATTTCG CTCTTCCATT ACGCTCTGCA ACCCGGTGGG
GTGCTGTTTT TGGGCACCTC GGAGACGGCT GGCGAGGCCG GCGGTTTGTT TGCCGTGCTG
CAGCGCAAAG CCAAGATATA CCAGCGCAAG GAGGATTTTC AAGGGGCGCA GCGCGCCGCC
CTGGGCCGGT TTTTGCCACC CTTGACCGAC CAGGACATCA CACGGCCGGT TGCACCTGGC
AAAGGCGCAC AGCTGCCCAA GCTGTCATTG CGCGAGCTGA CCGAGCAAAC CCTGTTGCAG
CAAGTGGCCC CGGTAGCGGC GCTTGTCAAC GGCCACGGCG ACATCCTCTA CCTGCATGGG
CGCACGGGCC TGTACCTGGA GCCCGCGCCG GGCGAAGCGG GTATCAACAA CATCCTGAAA
ATGGCGCGTG AAGGCCTGCG CCGCGACCTG ACCACCACCC TGCACAAAGC CGCCACCAGC
CGCGACACCG TGCGCGCGTC GGGTGTGCGG GTCAAGACCA ACGGCCACTT CACGCTGGTC
AACCTCAGCA TTTGCCCGGT GGCGGGCGGC CCGGCGGCAG CGCTGGAGTC GCCTCTGTTT
TTGGTGATGC TGGAAAAAGC ACCCGATGCC AACGCCGCTG AGTCCAAAAG CCCGCCAGCC
CCCGCCACCC TGCCGGCCAT CAGCGCGGCC GGCGGCAGCG ACAAGCTGCG CTCTGACGCC
AGCGCCCAGA TTGCCGAACT CAACGAAGAG CTGCAAGCCA AAGAAGAATA CCTGCACGCG
GCCAATGAAG AGCTGGAAAC CACCAACGAA GAGCTCAAAT CAAGCAACGA AGAAATGCAG
TCGGTCAATG AAGAGCTGCA AAGCACCAAC GAAGAACTGG AGACTTCCAA GGAAGAAATG
CAGTCGATCA ACGAGGAGCT GTCCACGGTC AACACCGAGC TGCAAACCAA GGTGAGCGAT
CTGTCACGCG CCAACAACGA CATGAACAAC CTGCTGGCAG GCACCGGCAT TGGCACCATT
TTTGTGGACC ATGCCTTGCG CATCCTGCGC TTTACCCCGG CCGCAAGCCA GATCATCAAC
CTGATTCTGA GCGACGTGGG GCGTCCGGTG GCCCACATCG TGAGCAATAT GGTGGGCTAC
AACACCCTGG TGGAAGACCT GCAGGCCGTG CTCAAAACCC TGATCCCCAA AGAGGTGGAG
GTGCAGACCA CCGACGCTAA GACCTACACC CTGCGCATCC TGCCCTACCG CACGCTCGAC
AACGTGATTG AAGGCGCGGT GATCACTTTT GTTGAAATCA CCGAAGTCAA GCGCACGCGC
GCAGCGCTGC ACAAAACCAA TGAACTGCTG CGCCTGGCGG TGGTGGTGCG CGACGCGCAT
GACGCCATCA CGGTGCAGGA CCTGAGTGGA CGCATCATCG CCTGGAACCC GGGCGCGGAG
CGCTTGTATG GCTGGAGCGA GCTTGAAGCA CTGCAAATGA ACGTGCGTAC CCGCATCCCC
GCGGAACTGC AAGAAGAAGC CCTGGCCCAG GTACACCTGC TCAGTCAGGC GCAAACGCTG
GCGCCCTACC CGACCCGGCG GCTGACCAAG GACGGCCGGG TGCTGAACGT GTTGTTGACC
GCCACTGCCT TGCTCGATGA GGCGGGCCAG GTGTATGCGA TTGCCACCAC CGAACGGCCC
AGCGATGACC CGGTCGCGAA AGGCTAA
 
Protein sequence
MTGQDPSPAP TQAVPTPPPS SFPIVGIGAS AGGLAAIEAF FSGMPADVDP GMAFVLVQHL 
DPDHKSILTE LIQRTTRMQV SEVKDGMPVQ PNCVYIIPPN RDMAFLNGTL QLLEPAAPRG
HRLPIDFLFR SLALDQHEHA IGIVLSGTGS DGTLGVRAIK IDGGMVMVQS PASCEFDGMP
QSALATGLVD YELPPAEMAP QLIAYVTHAF GHPPQSATVA EPHTENALKK IFVLLRSQTG
HDFSQYKPNT IYRRIERRMA VHQIDGIGGY VKYLQQTPVE VQALFNDLLI GVTNFFRDPD
AFAVLESQVI PKLFEGKPAG SAVRVWCAGC STGEEAYSIA ILLQERLETL KVSYRVQVFA
TDIDSRAIAV ARAGLYPGSI ADDISPERLA RFFTAEPDGS AYRIHKNIRD LLVFSEQDVI
KDPPFSKLDL ISCRNLLIYL GPELQKKLIS LFHYALQPGG VLFLGTSETA GEAGGLFAVL
QRKAKIYQRK EDFQGAQRAA LGRFLPPLTD QDITRPVAPG KGAQLPKLSL RELTEQTLLQ
QVAPVAALVN GHGDILYLHG RTGLYLEPAP GEAGINNILK MAREGLRRDL TTTLHKAATS
RDTVRASGVR VKTNGHFTLV NLSICPVAGG PAAALESPLF LVMLEKAPDA NAAESKSPPA
PATLPAISAA GGSDKLRSDA SAQIAELNEE LQAKEEYLHA ANEELETTNE ELKSSNEEMQ
SVNEELQSTN EELETSKEEM QSINEELSTV NTELQTKVSD LSRANNDMNN LLAGTGIGTI
FVDHALRILR FTPAASQIIN LILSDVGRPV AHIVSNMVGY NTLVEDLQAV LKTLIPKEVE
VQTTDAKTYT LRILPYRTLD NVIEGAVITF VEITEVKRTR AALHKTNELL RLAVVVRDAH
DAITVQDLSG RIIAWNPGAE RLYGWSELEA LQMNVRTRIP AELQEEALAQ VHLLSQAQTL
APYPTRRLTK DGRVLNVLLT ATALLDEAGQ VYAIATTERP SDDPVAKG