More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2355 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009621  Smed_5776  putative PAS/PAC sensor protein  39.15 
 
 
1160 aa  640    Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.51 
 
 
1120 aa  640    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.52 
 
 
1190 aa  645    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  48.19 
 
 
971 aa  791    Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  44.67 
 
 
1027 aa  675    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  47.46 
 
 
868 aa  755    Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  40.45 
 
 
1384 aa  647    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  58.55 
 
 
980 aa  1153    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  42.11 
 
 
1399 aa  671    Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  47.72 
 
 
993 aa  820    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  46.6 
 
 
1035 aa  768    Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  47.3 
 
 
887 aa  780    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  40.84 
 
 
1408 aa  675    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.73 
 
 
1167 aa  655    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  45.62 
 
 
1000 aa  771    Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  46.94 
 
 
879 aa  775    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.96 
 
 
1404 aa  637    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  100 
 
 
1008 aa  2055    Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  45.92 
 
 
877 aa  721    Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  39.33 
 
 
1348 aa  646    Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  41.79 
 
 
1092 aa  645    Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  42.87 
 
 
852 aa  640    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  47.3 
 
 
1138 aa  765    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  41.14 
 
 
1407 aa  651    'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  47.26 
 
 
998 aa  798    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  48.57 
 
 
1008 aa  792    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  45.54 
 
 
840 aa  730    Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  54.22 
 
 
1006 aa  1060    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  45.49 
 
 
840 aa  722    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  41.84 
 
 
1361 aa  696    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  38.59 
 
 
1535 aa  632  1e-179  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  39.84 
 
 
1218 aa  618  1e-175  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  40.34 
 
 
1274 aa  619  1e-175  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  39.81 
 
 
1380 aa  613  9.999999999999999e-175  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  42 
 
 
1045 aa  611  1e-173  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  38.68 
 
 
1371 aa  606  9.999999999999999e-173  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  39.46 
 
 
1344 aa  607  9.999999999999999e-173  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  40.13 
 
 
1445 aa  603  1.0000000000000001e-171  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  39.38 
 
 
1483 aa  605  1.0000000000000001e-171  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  41.17 
 
 
1233 aa  605  1.0000000000000001e-171  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  39.72 
 
 
1222 aa  597  1e-169  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  40.66 
 
 
856 aa  595  1e-169  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  39.84 
 
 
1306 aa  597  1e-169  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.43 
 
 
1061 aa  586  1e-166  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  37.14 
 
 
1215 aa  588  1e-166  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  40.16 
 
 
1279 aa  586  1e-166  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.78 
 
 
1324 aa  583  1.0000000000000001e-165  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  39.38 
 
 
1303 aa  585  1.0000000000000001e-165  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  39.98 
 
 
1242 aa  584  1.0000000000000001e-165  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  38.63 
 
 
820 aa  578  1.0000000000000001e-163  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.7 
 
 
1168 aa  578  1.0000000000000001e-163  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.5 
 
 
1063 aa  573  1.0000000000000001e-162  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  38.11 
 
 
1010 aa  567  1e-160  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  39.7 
 
 
1499 aa  562  1e-158  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  42.18 
 
 
1163 aa  551  1e-155  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  39.72 
 
 
853 aa  543  1e-153  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  37.69 
 
 
1337 aa  534  1e-150  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  37.84 
 
 
1759 aa  532  1e-149  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  36.6 
 
 
1698 aa  523  1e-147  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  37.56 
 
 
1149 aa  520  1e-146  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  36.96 
 
 
1170 aa  504  1e-141  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  34.05 
 
 
1200 aa  505  1e-141  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  36.96 
 
 
1170 aa  504  1e-141  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  36.99 
 
 
2468 aa  499  1e-140  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  37.74 
 
 
1418 aa  500  1e-140  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.74 
 
 
1158 aa  502  1e-140  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  35.04 
 
 
1453 aa  497  1e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  37.24 
 
 
1165 aa  496  9.999999999999999e-139  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  37.19 
 
 
1535 aa  493  9.999999999999999e-139  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  36.78 
 
 
1618 aa  479  1e-133  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  41.75 
 
 
617 aa  458  1e-127  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  36.17 
 
 
1378 aa  455  1.0000000000000001e-126  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  42.27 
 
 
639 aa  452  1e-125  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  33.3 
 
 
1248 aa  444  1e-123  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.3 
 
 
1089 aa  442  9.999999999999999e-123  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  33.41 
 
 
1220 aa  424  1e-117  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  34.1 
 
 
1214 aa  422  1e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  36.82 
 
 
837 aa  422  1e-116  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  36.32 
 
 
1084 aa  400  9.999999999999999e-111  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  31.94 
 
 
823 aa  389  1e-106  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  40.31 
 
 
629 aa  384  1e-105  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  38.81 
 
 
1110 aa  363  6e-99  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  43.93 
 
 
432 aa  362  2e-98  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  41.27 
 
 
824 aa  357  6.999999999999999e-97  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  30.96 
 
 
813 aa  354  5.9999999999999994e-96  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.09 
 
 
1193 aa  347  4e-94  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  39.34 
 
 
604 aa  333  1e-89  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.96 
 
 
1303 aa  317  7e-85  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.43 
 
 
2031 aa  265  4e-69  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  46.34 
 
 
336 aa  241  6.999999999999999e-62  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  26.23 
 
 
631 aa  216  9.999999999999999e-55  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  37.4 
 
 
618 aa  205  4e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.58 
 
 
617 aa  183  1e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_009712  Mboo_1581  protein-glutamate O-methyltransferase  38.4 
 
 
269 aa  179  3e-43  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.175681  normal  0.125652 
 
 
-
 
NC_008576  Mmc1_2635  CheB methylesterase  36.69 
 
 
262 aa  171  6e-41  Magnetococcus sp. MC-1  Bacteria  normal  0.177706  normal 
 
 
-
 
NC_008576  Mmc1_3393  putative PAS/PAC sensor protein  33.53 
 
 
545 aa  164  8.000000000000001e-39  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  33.2 
 
 
302 aa  162  3e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_1545  protein-glutamate O-methyltransferase  37.1 
 
 
264 aa  161  7e-38  Methanoculleus marisnigri JR1  Archaea  normal  0.474689  n/a   
 
 
-
 
NC_013385  Adeg_2021  MCP methyltransferase, CheR-type  37.45 
 
 
256 aa  159  3e-37  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4203  MCP methyltransferase, CheR-type  35.06 
 
 
264 aa  153  2e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0106813  n/a   
 
 
-
 
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