| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0460 |
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| Symbol | |
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| ID | 4078342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 477198 |
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| End bp | 479711 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005756 |
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| Product | MCP methyltransferase, CheR-type |
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| Protein accession | YP_612455 |
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| Protein GI | 99080301 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.604812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GAAGTATTCC TTTTTTGGTT GGTATCGCTG CTTCCGCTGG GGGGCTTGAG
GCTCTGTCCG AACTGGTTCA GGAGCTCGGA GAGCAAAATG AAGCGGCCTA TGTGATTGCC
CAGCATATGT CGCCAAATCA CAAGAGCATG CTCAGTGCGT TGATTTCTCG CGAAACGAGA
TTGCCGGTTC GTGAGCTGAC ACCCGATGCG GACATCTGGC CGGAGGCCAA CACGATTTAT
GTGGTGATGC CCGGCCATGA CGTCATCGTC ACCGAAGGTG GCCAGCTGGG GCTGCGAGCA
CCGAGCGGGC TGCGCGGGCA GCCAAAACCG CTTGCGGATC TGTTGTTGAA AACCATGGCC
GAGGAATGCG GCGAAAACTG CGCCGCGATT ATTCTTTCAG GCACTGGGAG TGATGGCAGC
TATGGGGTGC GCGCCATTCG CGAGGTGGGC GGCATTACCA TTGCACAGGA TCCCGAGAGT
TCCAAATATT CCGGGATGCC GACCTCTGCG TTGCAAACCG GCTGCGTTGA TCTGACGCTT
CGTCCGCGTG AAATCGGTGA GCACTTGGGG AAAATCCTTT CCCGTCCCCG GGATTTCACC
GAATTGCAGG AGCTGCATCA AAAGCCAAAT CACCTGTCTG ATCTGTTCCA GATCCTGACG
GCGCGCACCG GTGTGGATTT TCGCGAATAC AAGGCGTCGA CCATCAACCG CCGCATTGCG
CGTCGGATGC TGGCCCTCGG TTTTTCGGAA TACAACGCCT ATGTGGATTT TTGCCGCAGC
GACCTTGCTG AAGTGGATGC GCTTTATAAG GATCTGATGA TCTCCGTAAC GCGGTTCTTT
CGCGATCCCC AGCAATTTGA TGCCCTGAAG GCCGATATTC AAAAGCTGGT TGCAAAGCTC
GAATCCTCAT CCGATCAGCG AACGGTTCGC GTCTGGGTGT CTGGCTGCGC CACAGGCGAA
GAAGCCTATT CGGTTGCAAT CCTGTTTTTG GAAGCGATGG GCGGCCTTGA AAAAGTATCC
CAGCGCCGAT TGCAGGTGTT TGCCACCGAT ATTGACCAGC ATGCACTGGA TGTGGCGCGA
CGTGGGGAAT ATCCGATCTC TGCGATCAAT GACATTCCGC AGGAATTGGT TGATCGCTAT
TTTGTCGAGC GCACTGACAC CATCGAGGTC AAAAAGGCGC TTCGGGCTTT TGTCCTGTTT
TCGCGCCACA ACGTCATCCA GGATCCGCCG TTCACCAATC TCGACTGTGT GAGCCTGCGT
AACCTGCTGA TTTATTTCAA TGGGCCCTTG CAGGACAAAG TGCTCGCACG GATCGGTTAC
GCTCTGGTCC CTGATGGGCT GCTGTTCCTT GGGGCTGCCG AAACCGTGGG TGGGATGGAG
ACGATCTTTG AACCCACCAG CACCTCCGAC CGGATCTACC GCAAAAGACT CGTGACGCGC
AAACCCGCGC TGCAACCGTT CATCGAGGAT GCAACGGCCC GGCGCCCCTT AGAGCAGTCC
GCGCTGCCGT ATCTGGCTGA CAAGAATAAG CACCATAGTG CGACACGACA ATTTGACAAT
CTGATCCGTG TGTTGGCCCC AAATGGTTTC CTCGCCAGCG CCACAGGCGC GATCCTGCGC
GTGATTGGCG ACATCTCATT TGTGACCGCA CTGACGGAAA ACACCGGGCT GCAGGTGGAC
CTCAAGATCC TGCTCCCGGA GTTGCGCAGC GAAGCCTCAA GTCTGATCAA TGTCACCTTG
CGCTCACGCG GTGTGCGCAG TGGCCAGTGG CATCCTTTAC CACGGTCCAA GCATGAACAG
GTGCGTCTGA CCTGCTATCC TATCGTCTCC GCGCCAGACG GTGAAATGGA CGGCAACAGC
ATTGTTCTGA TCGGCGTCGA ATCTCGGATC AAGGAAGAGC AGGCCGCACC GCCCGAGAGC
CGCAATCCCG AGGAACAGGA TCGCTATATT CGTCAGATCG AGGACGAGGT GATCTCAACC
CGCGAGGCGC TCCAGCAGAC CATTGAAGAG TTGCAGACTG CCAACGAGGA ACTGCAGTCG
GTCAACGAGG AAATGCAGGC CGCCAACGAG GAATTGCAAT CCACCAATGA GGAGCTTGAA
ACCTCCAACG AGGAATTGCA GTCCACCAAT GAAGAGCTGA TCACCGTCAA CGAGGAAATT
CAGGTCAACT CCAGCGAGAT CCAGCATCTG AGCGCGGAGC TCAGTGCAGT ATTGCGGGCC
AATCCTTTTG TGATGATCGT GGTGGATCAG GCTCTGCAGG TGCGTCACGC TTCGCGACAG
GCAATGACGA TGTTCGAATT GGACGCCCTT CCCAAGTCGG GCATCCACAT CAGCCAATGC
GCGCCCGTTG AAGGGATGCC GGATCTGACG TCCCGGATTT CTCATGTCTT CCGTACCAGT
GCGCCCCTGG TCGAAAACGC CGAGTTTGGC GGTGCATCGC ATGAAATGAC ATTCACGCCG
TTTCGGGAGC GCGAAGGCCG GGACCTCATC GGGGTGGCCG TCACCATCGT CTAG
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| Protein sequence | MSDRSIPFLV GIAASAGGLE ALSELVQELG EQNEAAYVIA QHMSPNHKSM LSALISRETR
LPVRELTPDA DIWPEANTIY VVMPGHDVIV TEGGQLGLRA PSGLRGQPKP LADLLLKTMA
EECGENCAAI ILSGTGSDGS YGVRAIREVG GITIAQDPES SKYSGMPTSA LQTGCVDLTL
RPREIGEHLG KILSRPRDFT ELQELHQKPN HLSDLFQILT ARTGVDFREY KASTINRRIA
RRMLALGFSE YNAYVDFCRS DLAEVDALYK DLMISVTRFF RDPQQFDALK ADIQKLVAKL
ESSSDQRTVR VWVSGCATGE EAYSVAILFL EAMGGLEKVS QRRLQVFATD IDQHALDVAR
RGEYPISAIN DIPQELVDRY FVERTDTIEV KKALRAFVLF SRHNVIQDPP FTNLDCVSLR
NLLIYFNGPL QDKVLARIGY ALVPDGLLFL GAAETVGGME TIFEPTSTSD RIYRKRLVTR
KPALQPFIED ATARRPLEQS ALPYLADKNK HHSATRQFDN LIRVLAPNGF LASATGAILR
VIGDISFVTA LTENTGLQVD LKILLPELRS EASSLINVTL RSRGVRSGQW HPLPRSKHEQ
VRLTCYPIVS APDGEMDGNS IVLIGVESRI KEEQAAPPES RNPEEQDRYI RQIEDEVIST
REALQQTIEE LQTANEELQS VNEEMQAANE ELQSTNEELE TSNEELQSTN EELITVNEEI
QVNSSEIQHL SAELSAVLRA NPFVMIVVDQ ALQVRHASRQ AMTMFELDAL PKSGIHISQC
APVEGMPDLT SRISHVFRTS APLVENAEFG GASHEMTFTP FREREGRDLI GVAVTIV
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