| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4422 |
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| Symbol | |
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| ID | 8360595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5516726 |
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| End bp | 5520550 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966579 |
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| Product | signal transduction histidine kinase with CheB and CheR activity |
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| Protein accession | YP_003124067 |
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| Protein GI | 256423414 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.381764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATACGC TTATGAAGGA ACTTGAAACC AGTTATGATA AGGAAAGCAT ACTCGCCGGC
CGCCCCAATA AAGACGACCT GCTGGTAGTA GGAATCGGTG CTTCCGCCGG AGGTATCCGG
GCATTGCAAT GTTTTTTTGA AAACGTTCCT GCCAATCCGG GAATGGCCTA TGTAGTGATA
CTCCACCTGT CTCCTGATCA TGACAGTCAG CTGCAGCAAT TGCTGCAACA CGTAACACCA
CTCAAGGTGA CATTAATTAC GGAAAAGACC CGGGTGCAGC CTGATCATGT ATACGTAGTT
TCTCCGGACC AACACCTGAT CATGTCAGAT GGTCACATCA TTCCTTCCAG TAATGCCGGA
ATAGAGGAGC GGAGAGTGCC TGTAGACATA TTTTTCCGTA CACTGGCCAA TTCCCTCGGA
CCGCGTGCCG TCTGTGTCGT TCTCTCCGGA ACAGGCGCTA ACGGCTCCAT GGGATTGAAA
CGTGTAAAGG AATGTGGTGG CGCAGCTTTC GTACAGAATC CCCGTGAGGC GGAATACAAT
GAAATGCCCA GAAACGCCAT AGCTACCGCG ATGGTAGATG ATATACTGCC GGTGTCAGAA
ATACCAGAGA AAATAATAGC GTATAAATTG AATCTCGGAT CTGTTCAGAT TCCGGTAGAC
AGTGAAAAGC GCGCTGAAGA AGAACAACAT GCACTGCGCG AAGTCTTTAC ACACCTTAGA
CTGCGCACGG GGCATGATTT TTCAAATTAT AAACGTCCAA CATTGTTACG TCGTATTGAA
CGTCGTATCA ATATCAGAAA TCTCAGCAGC TTACAGGCAT ATGCTGCTTA TTTAAAACAT
AATCCCGAAG AGATCAGTGC ATTGCTGAAA GATCTGCTGA TATCCGTCAC CAATTTCTTT
CGTGACAAAA AAGCATTTGA TGCACTAGAG AAAGATGTCG TTCCTGCCAT CCTGCAAAAT
AAAAAAGCAG AAAATCAGGT AAGGATATGG ATCGCCGGCT GTGCAACTGG TGAAGAAGCA
TATTCTCTCG CAATTTTATT CGCAGAAAAA ACAATGGGAT CCATAGATGA TCCTAAAATT
CAAATCTTCG CAACCGACAT CGACGAAGCT GCTATCGCCG TAGCACGCGA AGGGTATTAT
ACACTCAATG ATGCAGCTGA TGTATCACCA GCGCGTTTAA GACGTTTTTT CAATAAGGAA
GGAGAAGGTT ATCGTATCAA AAGAGAAATC AGAGAAACGA TTCTGTTTGC CAGTCATAAC
TTTCTGAAAG ATCCTCCTTT CTCTTACCTG GACATGGTGT CCTGCAGAAA TGTATTGATA
TACCTTAATC ATACCGCACA GGAAAGGGTC ATGGAAACTT TCCATTTTGC CCTGAAACCA
GGCGGGTTCC TGATGCTAGG TTTGTCTGAA TCAGCAGAAA GCGCCAGCGA TCTCTATACT
TTGTTCAACA GGGAGTTTCA CATCTTCCAG TCTAAACGTA TTGTACAAAG TAATTACCCC
GTACCGGAGT CAGTACCTCA TTTTAATTTC AAGGAGCCTG CAGCATCTCA GGCGGTTATC
TCTCAGGAGA ACAGAACCCG CGAACGGGTC ATGAGAAATG ATCTGCATCA GCGCCTGCTG
GAAGAATATG CACCTCCTTC GATGGTGATC AATGAAGAAT ATGACATCCT TCATCTGTCA
GAAAGGGCGG GCAGATACCT GCAAATGACA GGTGGTGAAC CATCTCAGAA CCTGTTGAAA
CTGGTACGCC AGGACCTGTG TCTGGAATTA CGTTCCGCGC TCTATCAGGC TGTACAGCGA
CAGATAGCTG TAGAAGCACA AGGATTAAGG GTGTCAATTG ATGGACAGTC GGAAAATGTG
AATATTCATA TACGTCCCGT GTTCCGGCAG GGAGATATTG CCAATGGCCT CATACTGGTG
ATTTTTGAAC AAAGTATGGA AGATGCCGGT GGACAGGTAA TTCTCTCTTC AGATGAACCG
TTAGCACGTC AGCTCGAAGA AGAATTGATA AGACTGAAAG CACAACTCCG CGCCTCTATC
GAACAACATG AATTCCAGCA GGAAGAACTG AAGGCATCTA ATGAGGAATT GCAGGCGATG
AATGAAGAAC TACGCTCTGC TGCTGAGGAA CTGGAGACAA GCAAAGAGGA ACTGCAGTCT
ATTAATGAGG AATTACGCAC CGTTAACCAG GAACTGAAGG TAAAAGTGGA TGAAACCACA
TTGGCAGGCA ATAACCTGCA AAACCTGATC AATTCCGCCG AAATAGGAAC CATTTTTCTC
GACCGGAGTT TGAGACTGGC GTTGTTTACA CCGCCCGCCA GAACGGTGTT TAACTTTATT
CCGAATGATA TTGGCAGACC CTTATCTGAC ATCACCAACA AACTGAATTA TGACGATATT
ATTTCCGATG CAGAAGCTGT CCTGGAAAAA CTTCTGACAA TAGAGCGGGA GGTCTCGTCA
ATAGATGGAC GCATTTTCCT GATACGTATT CTCCCTTATC GTACAGAAGA AGATCGTATC
AATGGCGTTG TAATGACCTT TATTGATATG ACGCAGCATA AAAAAGCCGA GATAGTGCTG
CGCGAAAATC AGGCATGGCT GAATGGACAG AAAGAAGCTT TTCAGGCTGC GATGAATGGT
CAATCCCTGA CCAGTTCTCT GAATCCCTTG ATCAGAACAG TGATTGATCA GATGGATGGA
GAAGCCAGGT CTGCATTTTA TATGACGCCG TCAGGAGGTG AGGGACTACA TCTGGTGGCA
GGTATGACCG AAGAATATGC AAAAGATATT AACGGCTTTC AGATCGGTCC TGAATCGCTT
GCATGTGGCC TGGCTATGCA CACTGGTGAC CCGGTGATTA CGGAAGATAT CGAAGAAGAT
CCCCGTTGGG AGCAATGGCG CCCGATTGCC CGTAAATACG ATTACCGTGG TTGCTGGTCT
TTCCCTGTCC GGACCATCGG AGGCCCTATA CTAGGCACAC TCGCCATCTA CTTCAGGCAG
CCACGAAGTC CGCAGCAAAG AGAACTGGAG ATGGCCGCAA TAATTACTCA TTCTGCCAGC
ATTATCATTT CAAGATATAA TGAAGCAGTT GAACGTGCAC AGGCAGAGGA AGCGCTGCGC
CTGAGCGAAC AACGCTTAAA AAACCTGCTG AAAATCCGGG AAGAGTTTAT AAGTGTTGCC
AGCCATGAAC TGAAAACACC TATTACCAGC ATGAAAGTGT ACGCTGAGAT AGTGGAAGAA
AGGATGGCTG AAACAGGTAA CCATGAAGAT GGTGAACTCA TTTCGCGCCT GAATGAACAG
ATTGACCGTC TTACGGTGTT AATCAACCTA CTGCTGGATA CCACAACAAT CTCGGAAGGG
AAGTTGAAAA TGAATTTCAC AGATGTAGAT ATCAAAAAAG TGGTCGCCGA AAAGCTGGGA
GATATCCAAC GTGCCGGTAC ACATAAGTTT GAATTACAGA CAGAGGAGCT ACCCCTCATC
AGCGCAGATG CCGAGCGCAT AGGACAAGTA GTCACAAATC TGCTGTCAAA TGCGATTAAA
TATTCCCCTG CAGGTAGTAC CGTGCGTATT GCTGTTCGTA AGGAGAAAGA AAGAATACAG
GTGAGCGTGC AGGACCAAGG CTACGGTATC CCGAAAGCAC ACCAGCAAAA GATCTTCGAC
AGGTTCTATC GCGTCACTAC CGATAACTTT GACACCTTCC CGGGTATGGG CCTCGGGTTA
TATATATCCG CACAGATTAT CCAGGGACAT CATGGCGCTA TCGACGTAGA AAGTGAGGAG
GGAAAAGGAT CCAATTTTTC ATTCACACTA CCCATTAAAT CTTGA
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| Protein sequence | MYTLMKELET SYDKESILAG RPNKDDLLVV GIGASAGGIR ALQCFFENVP ANPGMAYVVI
LHLSPDHDSQ LQQLLQHVTP LKVTLITEKT RVQPDHVYVV SPDQHLIMSD GHIIPSSNAG
IEERRVPVDI FFRTLANSLG PRAVCVVLSG TGANGSMGLK RVKECGGAAF VQNPREAEYN
EMPRNAIATA MVDDILPVSE IPEKIIAYKL NLGSVQIPVD SEKRAEEEQH ALREVFTHLR
LRTGHDFSNY KRPTLLRRIE RRINIRNLSS LQAYAAYLKH NPEEISALLK DLLISVTNFF
RDKKAFDALE KDVVPAILQN KKAENQVRIW IAGCATGEEA YSLAILFAEK TMGSIDDPKI
QIFATDIDEA AIAVAREGYY TLNDAADVSP ARLRRFFNKE GEGYRIKREI RETILFASHN
FLKDPPFSYL DMVSCRNVLI YLNHTAQERV METFHFALKP GGFLMLGLSE SAESASDLYT
LFNREFHIFQ SKRIVQSNYP VPESVPHFNF KEPAASQAVI SQENRTRERV MRNDLHQRLL
EEYAPPSMVI NEEYDILHLS ERAGRYLQMT GGEPSQNLLK LVRQDLCLEL RSALYQAVQR
QIAVEAQGLR VSIDGQSENV NIHIRPVFRQ GDIANGLILV IFEQSMEDAG GQVILSSDEP
LARQLEEELI RLKAQLRASI EQHEFQQEEL KASNEELQAM NEELRSAAEE LETSKEELQS
INEELRTVNQ ELKVKVDETT LAGNNLQNLI NSAEIGTIFL DRSLRLALFT PPARTVFNFI
PNDIGRPLSD ITNKLNYDDI ISDAEAVLEK LLTIEREVSS IDGRIFLIRI LPYRTEEDRI
NGVVMTFIDM TQHKKAEIVL RENQAWLNGQ KEAFQAAMNG QSLTSSLNPL IRTVIDQMDG
EARSAFYMTP SGGEGLHLVA GMTEEYAKDI NGFQIGPESL ACGLAMHTGD PVITEDIEED
PRWEQWRPIA RKYDYRGCWS FPVRTIGGPI LGTLAIYFRQ PRSPQQRELE MAAIITHSAS
IIISRYNEAV ERAQAEEALR LSEQRLKNLL KIREEFISVA SHELKTPITS MKVYAEIVEE
RMAETGNHED GELISRLNEQ IDRLTVLINL LLDTTTISEG KLKMNFTDVD IKKVVAEKLG
DIQRAGTHKF ELQTEELPLI SADAERIGQV VTNLLSNAIK YSPAGSTVRI AVRKEKERIQ
VSVQDQGYGI PKAHQQKIFD RFYRVTTDNF DTFPGMGLGL YISAQIIQGH HGAIDVESEE
GKGSNFSFTL PIKS
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