More than 300 homologs were found in PanDaTox collection
for query gene Ppha_0229 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  70.69 
 
 
1000 aa  1206    Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  37.25 
 
 
1535 aa  642    Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  58.31 
 
 
868 aa  966    Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  45.28 
 
 
980 aa  740    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  74.18 
 
 
1035 aa  1337    Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  59.19 
 
 
887 aa  1019    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  47.03 
 
 
1008 aa  793    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  57.85 
 
 
971 aa  1008    Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  37.43 
 
 
1361 aa  654    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  46.29 
 
 
1008 aa  762    Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  57.44 
 
 
877 aa  962    Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  59.93 
 
 
879 aa  1048    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  50 
 
 
852 aa  819    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  68.91 
 
 
993 aa  1244    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  100 
 
 
1138 aa  2338    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  71.02 
 
 
998 aa  1278    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  56.36 
 
 
840 aa  942    Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  44.56 
 
 
1006 aa  705    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  56.24 
 
 
840 aa  938    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.2 
 
 
1190 aa  628  1e-178  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  37.84 
 
 
1274 aa  627  1e-178  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  42.33 
 
 
1483 aa  622  1e-177  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  37.29 
 
 
1408 aa  625  1e-177  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  38.3 
 
 
1160 aa  619  1e-176  Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  39.72 
 
 
1218 aa  622  1e-176  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  39.13 
 
 
1384 aa  622  1e-176  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.05 
 
 
1404 aa  622  1e-176  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.61 
 
 
1399 aa  612  1e-173  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  40.36 
 
 
856 aa  604  1.0000000000000001e-171  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.98 
 
 
1167 aa  603  1.0000000000000001e-171  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.47 
 
 
1120 aa  602  1e-170  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  40.85 
 
 
1092 aa  602  1e-170  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  39.11 
 
 
1222 aa  597  1e-169  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  36.77 
 
 
1407 aa  599  1e-169  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  39.36 
 
 
1233 aa  593  1e-168  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  40.28 
 
 
1027 aa  592  1e-167  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  35.28 
 
 
1380 aa  584  1.0000000000000001e-165  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  39.35 
 
 
1371 aa  581  1e-164  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  38.27 
 
 
1445 aa  580  1e-164  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  39.84 
 
 
1279 aa  578  1.0000000000000001e-163  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  39.61 
 
 
1242 aa  574  1.0000000000000001e-162  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  35.29 
 
 
1348 aa  563  1.0000000000000001e-159  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  40.02 
 
 
1045 aa  561  1e-158  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  47.39 
 
 
639 aa  558  1e-157  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  39.48 
 
 
1306 aa  557  1e-157  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  35.71 
 
 
1215 aa  555  1e-156  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  37.35 
 
 
1149 aa  552  1e-155  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  38.16 
 
 
1010 aa  552  1e-155  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  37.28 
 
 
820 aa  551  1e-155  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.67 
 
 
1168 aa  538  1e-151  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.01 
 
 
1324 aa  536  1e-151  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.33 
 
 
1061 aa  523  1e-147  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  33.96 
 
 
1499 aa  526  1e-147  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  34.12 
 
 
1200 aa  522  1e-146  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.11 
 
 
1163 aa  518  1.0000000000000001e-145  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.98 
 
 
1158 aa  515  1e-144  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  36.21 
 
 
1170 aa  511  1e-143  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  36.21 
 
 
1170 aa  513  1e-143  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  35.16 
 
 
1344 aa  511  1e-143  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.47 
 
 
1063 aa  508  9.999999999999999e-143  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  33.72 
 
 
1453 aa  509  9.999999999999999e-143  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  32.43 
 
 
1759 aa  499  1e-140  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  33.17 
 
 
1337 aa  500  1e-140  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  37.01 
 
 
853 aa  496  1e-139  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  36.74 
 
 
1303 aa  483  1e-135  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  34.29 
 
 
1698 aa  481  1e-134  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  36.36 
 
 
1165 aa  478  1e-133  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  33.93 
 
 
1418 aa  476  1e-133  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  32.26 
 
 
1618 aa  473  1.0000000000000001e-131  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  33.41 
 
 
2468 aa  463  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  35.71 
 
 
1535 aa  453  1.0000000000000001e-126  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  33.11 
 
 
1248 aa  447  1.0000000000000001e-124  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  36.29 
 
 
824 aa  430  1e-119  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  39.97 
 
 
617 aa  430  1e-119  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  34.85 
 
 
1378 aa  427  1e-118  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  31.45 
 
 
1089 aa  427  1e-118  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  34.19 
 
 
837 aa  409  1.0000000000000001e-112  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  35.81 
 
 
1084 aa  384  1e-105  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  38.82 
 
 
629 aa  373  1e-102  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  30.47 
 
 
1220 aa  372  1e-101  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  29.86 
 
 
823 aa  364  7.0000000000000005e-99  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  31.01 
 
 
1214 aa  363  1e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  38.9 
 
 
1110 aa  360  6e-98  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  44.15 
 
 
432 aa  358  2.9999999999999997e-97  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.62 
 
 
1193 aa  356  2e-96  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  29.29 
 
 
813 aa  337  7e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  28.39 
 
 
1303 aa  300  1e-79  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_010717  PXO_03023  methyltransferase  34.07 
 
 
604 aa  278  5e-73  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  30.78 
 
 
631 aa  254  6e-66  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  27.58 
 
 
2031 aa  254  8.000000000000001e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.06 
 
 
617 aa  243  2e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.71 
 
 
618 aa  240  1e-61  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  39.59 
 
 
336 aa  214  7e-54  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_008576  Mmc1_2635  CheB methylesterase  41.08 
 
 
262 aa  172  3e-41  Magnetococcus sp. MC-1  Bacteria  normal  0.177706  normal 
 
 
-
 
NC_008576  Mmc1_3393  putative PAS/PAC sensor protein  30.32 
 
 
545 aa  169  2.9999999999999998e-40  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1797  multi-sensor hybrid histidine kinase  36.11 
 
 
1419 aa  155  2.9999999999999998e-36  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  30.5 
 
 
302 aa  155  5e-36  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013132  Cpin_6403  CheB methylesterase  44.02 
 
 
203 aa  154  1e-35  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00116583  normal 
 
 
-
 
NC_011832  Mpal_1514  multi-sensor signal transduction histidine kinase  36.43 
 
 
1253 aa  153  1e-35  Methanosphaerula palustris E1-9c  Archaea  normal  0.841858  normal  0.0475592 
 
 
-
 
NC_012918  GM21_1720  MCP methyltransferase, CheR-type  35.89 
 
 
278 aa  153  2e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000122266 
 
 
-
 
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