| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3640 |
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| Symbol | |
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| ID | 8359807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4568042 |
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| End bp | 4571953 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965809 |
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| Product | MCP methyltransferase, CheR-type with PAS/PAC sensor |
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| Protein accession | YP_003123303 |
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| Protein GI | 256422650 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.581797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATA CACATTCTGA AGGGGAGTTG AACAGAAGGC GATCTGGTTC GGTACCCAAT
GCTGCCTTAA AAAGCATATT AGCGATCCTT TCTGAATTTT CCGGGGTAGA TTTTCTGCAA
TACAAGATAT CCACCATCAC CAGAAGGCTT CAGCGAAGAA TGTCGCTTGT GAATATTCAG
CGATTTGAGG AATATCTTAC GTTTATAAAG GATAATGAGA ACGAGCAGAA CATTGTCTAC
GCAGACCTGC TGATCCACGT ATCATCATTT TTCAGGGACG AAGGGAGTTT TGAATACCTG
CTCAGGTTCA TACTTCCCCA GGTAGTCAGG TCGGCTCGCG AAAAGGAAGA ACAGGTGCGT
ATATGGGTCG CCGGATGTGC GACCGGCGAA GAAGCCTACT CCATTGCCAT GTGTCTCTAC
GAACTGATGG GAGATGACCA TTTTGCCAGC AACGTAAAGA TTTTCGCCAC AGACCTTTCG
GAAGCAGTCA TCGCTACTGC CCGTAAGGCT TTCTATACTG CATCACAGGT CGCCGGTGTA
TCCCCCGAGC GCCTGGAGCG TTTTTTTGTA GAAGTGGATC AGGGATATGA GATATCAGGC
GTCATCAGGG ATGCCTGTGT GTTTGCCTGC CACAACATGC TAACAGATCC GCCATTTGCG
AAGCTGAACC TTATCAGTTG CCGTAACGTG CTCATTTATA TGCAGCCCGT ATTGCAAAAG
AAAATGCTGA GCATATTCAA CTATGCCCTC AAGGACCGTG GTTTTCTCTG GCTCGGAAAG
TCAGAAACAA ACCGGTCTCC GGACCTCTTT GAGATGCCTT CCAAGAAAAC GAAGATTTAT
CTTAAAAAGA ATGTAGATAA ATGGACGCTG AGAAGTGCGT TCCCGACTAA TAAAAAAATA
AAGCATATGA CACCAAGCTT TGATCAGGAG AGGGATGAAA ATGTAGATGC TCAGAAAGCG
GCCGACAGTA TAATACTTTC CATGTATGCA CCGTCGGCAG TCCTGCTTAA TGAAAAACTG
GACATCGTAG AGTTCAGAGG TGTTACCATG CAGTTTTTTG AGCACGGTCC CGGTAAAGCG
AGTCTTAATA TCCTGAAACT GGCGCATAGA GACCTCGTGC ACAGCCTGCG TAGCGCGCTC
AGTCAGGCGC AGTCTACCAA AAGGAATGTC CGTAAGGATG GGCTGACCAT CACCACTGCC
TCCGGTACAC TCAATGTTTC CTTTGAGATC GTACCGATCA GTAACCTGCA CGAAAACTAC
TTCCTCGTTA TTTTCAATAA TCAGCAGAAC GATCTTGTCG GTAACGAAAT AGCTGCGAAA
AGGGTAGACG TTACAGAAAC TGCGGATGAA CAGAACCTGC GTATTTTCCA GCTGGAAAGA
GAAGTACAGC GTTATAAAGA AGAACTGCGC GCCGTGGCCG AAGCCTATGA GGCGACAAAC
GAAGAACTAC AGTCTGCCAA CGAAGAACTG AAAAGTCTGA ATGAAGAACT GGAAGTTTCC
CAGGAGGAAT TACAGGTCAT CAATGATGAA CTCAGCACCC GTAACAATGA TCTGCTGGAA
AGGAACAACC AGCTGAATAA TGCGCGCCTG TATGCCGAGT CTATCGTCAA TACCGTGCAT
GAATCCCTGT TGATCCTAGA TACCAATATC CGGGTAGTCA GTGCCAATGC TTCCTTCTAC
CGATCCTTTA AAATGGAACG TAAGGAGACT GAAGGTAAAC TGCTCTACGA ACTGGGAAAT
AAACAGTGGA ATACTTCGGA TCTGCGGTCA TTGATGGAAA ACCTCCTGAC TTCCCGCACG
CCGTTCGCTA ACTACGAACT GACCTATAAA TCCACCGGCA ACGGTACCCG TACCATCATG
ATGAACGGGC AGCTGATCAC TTCTCAGGAC CTGAAAGAAG AACTGATCCT CATTGCCATA
GAAGATATTA CAGAAGTAAG AGAGGCCAGG GAACGCATCG CCCGGAAACA GGAAGTGGTT
CGTAATAATG AAGAGCGACT GCGGCTTGCA CTGGAAGGAA CTCGTACCGG TACATGGGAC
TTCAATCCGC TGTCCAAAGA ACTGGTATTG TCTGACAGAA GCCGGGAGCT TTTCGGTATT
ACTGCGTTAA TGCCACTGGA CTTTGACAGC TTCCTCAAAG TGATCCATCC CGCAGATGCA
GCCGCTGCAC AGGGCCGTAT CTATGCAGCG CTGGCAGGAA AAGATAATGG ACAGATCAAC
GTCGATTTCC GTATCAATAT CTCCGAAGAA AAAGTGAACT GGATCTCCTG CAAGGCGCAG
GTGTTTTTCG ATGACCATAA CACTGCCGTG CGCGTATTAG GCGTAGTCAC GGACGTTACA
GAAAGCAAAC AGTTTGAAAA ACATTTACAG GAGGTCAATG ACCGCCTGAA TTTTGCTTTA
CAGACCGGCC GTCTCGGTTC CTGGGAACTC GATCTCACCT CAGGTGTGAT ACATGGAAAC
GAGCAATTCA AAAGTAATTA CGGACTGGCG TCACAGGCCG GCTTCACGTA TGAAAAGCTG
CTGGCGATGA TCCTGCCGGA AGATGTACGT CGTGCGGAAG AAGCCCTGCA ACATGCCCTG
AGTAACCGTA TGCTGTATGT GGAAGAGTAT CGTATCCGCT GGACGGACAG TTCTGTACAC
TGGATCGCAG CTACCGGTCA GGGTGTATAT GAGGAGGATG GTTCTGTGAA GAAAATGATC
GGTGTCACAA TGGATATCAC CGAAAGAAAG CTGGCACAGT TACACCTGCA GCAAAGTGAA
GCCTATTTCA GGATGATTGC AGATACCGCA CCGGCGATGA TCTGGATCGC CGAAAAAGAT
GGATCCTTCT CCTTCTTTAA TAAAGCCTGG CAGAAATATA CCGGCCGCTC CCTTGATCAG
AATAAAGACA ATGGCTGGTA CGATATCATG CATCCGGAAG ATACCGACAA ATGGAAGATC
AACTTCAGCC GTTCCTCCCG TGACAGAAAG AACTTCTACT CAGAGTTCCG CCTGAAACGC
CATGACGGTA CCTATCACTG GCTGGCCTGT TCAGGTATCC CGCGGTTTAA TTCACAGGAC
GAATTTGTTG GATTTATCGG CGCCTGTACA GATATTGATG ATCAGAAGAT GGTGGAAGAT
GCACTGGAAA GAAAAGTGCG GGAAAGAACC ATAGCCCTGG AAGACGCCAA TGCGAATCTG
TCCAAACGAA ATCACGAACT GGAACAGTTT GTATTTATCA CCTCGCACGA TTTACAGGAA
CCACTCCGGA AGATCCGCCT CTTTGCCGAT ATGCTGGAGA GCGTAAAACC TGGAACACCG
ACCAAAATAG ATACCGCCCA GTACCTGAGA AAGGTAAAAC AGTCTGCTAT CAGAATGTCT
GACCTGATCA GGGACCTGAT CGCCTATTCC CGCCTGGAAC TGGGTGAGAA TGCCTTCCTG
CCGGTGGACC TGAACCAGAT CGTCGTCAAT GTAATTGAAG ACTTCGAACT GCTGATCCGC
GATAAAAATG CGAAAATAGA TATCACGGAA CTGCCGGTTA TAGACGCGGT ACCTTTGCAG
ATGAACCAGT TATTTTATAA CCTGATCGGT AATGCCTTGA AGTTCTCCAT TCCGAACGGA
GAGTGCCGCA TTACCATCAC AGCCAATAAA ATATCCGATT CAGAACTGAA TGACCTGCCG
CTGCTGCCAA AAGGTCCGGG CTATTACCGG ATCATTGTGG CGGATAATGG TATCGGGTTT
AATCAGACCT ATGCGGACAA GCTCTTTGTT ATCTTCCAGC GACTGAATCA GAAGGAAAAA
TTCGAAGGAA CCGGTATCGG TCTGGCCCTC TGCCGTAAGA TCATGGATAT TCATAACGGT
GATATTCAGG CATTTGGAGT AGAACAACAG GGTGCAGCCT TTCATATTAT TATTCCGGAA
ACACAACAAT AA
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| Protein sequence | MPDTHSEGEL NRRRSGSVPN AALKSILAIL SEFSGVDFLQ YKISTITRRL QRRMSLVNIQ
RFEEYLTFIK DNENEQNIVY ADLLIHVSSF FRDEGSFEYL LRFILPQVVR SAREKEEQVR
IWVAGCATGE EAYSIAMCLY ELMGDDHFAS NVKIFATDLS EAVIATARKA FYTASQVAGV
SPERLERFFV EVDQGYEISG VIRDACVFAC HNMLTDPPFA KLNLISCRNV LIYMQPVLQK
KMLSIFNYAL KDRGFLWLGK SETNRSPDLF EMPSKKTKIY LKKNVDKWTL RSAFPTNKKI
KHMTPSFDQE RDENVDAQKA ADSIILSMYA PSAVLLNEKL DIVEFRGVTM QFFEHGPGKA
SLNILKLAHR DLVHSLRSAL SQAQSTKRNV RKDGLTITTA SGTLNVSFEI VPISNLHENY
FLVIFNNQQN DLVGNEIAAK RVDVTETADE QNLRIFQLER EVQRYKEELR AVAEAYEATN
EELQSANEEL KSLNEELEVS QEELQVINDE LSTRNNDLLE RNNQLNNARL YAESIVNTVH
ESLLILDTNI RVVSANASFY RSFKMERKET EGKLLYELGN KQWNTSDLRS LMENLLTSRT
PFANYELTYK STGNGTRTIM MNGQLITSQD LKEELILIAI EDITEVREAR ERIARKQEVV
RNNEERLRLA LEGTRTGTWD FNPLSKELVL SDRSRELFGI TALMPLDFDS FLKVIHPADA
AAAQGRIYAA LAGKDNGQIN VDFRINISEE KVNWISCKAQ VFFDDHNTAV RVLGVVTDVT
ESKQFEKHLQ EVNDRLNFAL QTGRLGSWEL DLTSGVIHGN EQFKSNYGLA SQAGFTYEKL
LAMILPEDVR RAEEALQHAL SNRMLYVEEY RIRWTDSSVH WIAATGQGVY EEDGSVKKMI
GVTMDITERK LAQLHLQQSE AYFRMIADTA PAMIWIAEKD GSFSFFNKAW QKYTGRSLDQ
NKDNGWYDIM HPEDTDKWKI NFSRSSRDRK NFYSEFRLKR HDGTYHWLAC SGIPRFNSQD
EFVGFIGACT DIDDQKMVED ALERKVRERT IALEDANANL SKRNHELEQF VFITSHDLQE
PLRKIRLFAD MLESVKPGTP TKIDTAQYLR KVKQSAIRMS DLIRDLIAYS RLELGENAFL
PVDLNQIVVN VIEDFELLIR DKNAKIDITE LPVIDAVPLQ MNQLFYNLIG NALKFSIPNG
ECRITITANK ISDSELNDLP LLPKGPGYYR IIVADNGIGF NQTYADKLFV IFQRLNQKEK
FEGTGIGLAL CRKIMDIHNG DIQAFGVEQQ GAAFHIIIPE TQQ
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