Gene Cpin_6403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6403 
Symbol 
ID8362587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8045861 
End bp8046472 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID644968531 
ProductCheB methylesterase 
Protein accessionYP_003126008 
Protein GI256425355 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00116583 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAC CGGATTTTTT TATAGCAGGA CTGGGATGTT CTGCGGGCTG TCTGGATGTA 
TTGAAGACAT TTTTTGCGAA CGTGCCGGAG CGGACGGGTA TTGCTTTTGT GGTGGTGCAG
CATTTATCGA GGAATTATGT GAGTATACTT GACAAGTTAT TGCAATCACA TACAAAACTG
CCGATTATAA GGGTATTGCA GGATATGGAT ATCAAGCCGG ATCATATTTA TCTGTTGCCA
GAGGGAAAGT TTTTATTGAT CAGGGAAGGG GTTTTACGTT TGATACCACG TACTACGACA
CAGGTGGTGA ATTATGCGGT GGATATATTT TTTACGTCAC TGGCGGCGTA TGCGGGTAAT
AAGGCGATTG GTATTATTCT GACCGGTATG GGGACAGATG GTTTAGAGGG GGCGAAGGCG
ATAGAGGGCG TGGGAGGGAT TGTATTTGTA CAGGAGCCGG CGTCGGCGGT GTTTAAGGGG
ATGCCGTTAT CGGTTATTAC GGGAGATGAA CCAGATGTGA TATTGCCGCC GGCGGAGCTG
GCACGATCGC TTGCGAAGTA TTATAAAACT GGCGGGATTC AGGATGATGA AGGGTTTGAG
GCGGCTGGGT AG
 
Protein sequence
MVKPDFFIAG LGCSAGCLDV LKTFFANVPE RTGIAFVVVQ HLSRNYVSIL DKLLQSHTKL 
PIIRVLQDMD IKPDHIYLLP EGKFLLIREG VLRLIPRTTT QVVNYAVDIF FTSLAAYAGN
KAIGIILTGM GTDGLEGAKA IEGVGGIVFV QEPASAVFKG MPLSVITGDE PDVILPPAEL
ARSLAKYYKT GGIQDDEGFE AAG