| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0905 |
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| Symbol | |
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| ID | 4895479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 928419 |
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| End bp | 931931 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640111490 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001042788 |
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| Protein GI | 126461674 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.968727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA TGCTTTCCGC CGCCGAATCC GCGGCCGATC GCGACCTGGT CCTTCTCGGG
ATCGGGGCCT CGGCCGGCGG GCTGGAGGCC TTCCAGAGCC TGCTCGGTGC GCTGAGGCCG
ACCGACCGGT TCGCGCTGAT CCTCGTGCAG CATCTCGATC CGGAACACGA AAGCCTGCTG
CCCGAGCTTC TGTCCAAGCG CACGCGGCTG CCGGTGCAGT CCATCGAGGA CGGAATGGAG
ATCGAGAGCG GCAACGTCTA TCTCATTCCG CCGGCCTTCG GCCTCGACAT CCGCGGCCGG
GTCCTGAAGC TCGTGCCGTT CGAGGCGCCG CGGGGGCTGC GCCGGCCCAT CGACAGCTTC
TTCCAGGCGC TCGCGCGCGA GCATGGCAGC AACGCGGCGG GCGTGATCCT GTCGGGCACG
GGATCGGATG GATCGAACGG CGTCCGGGCG ATCAAGGAGG CGGGCGGTCT CGTCTTCGCG
CAGGATCCCA AGGACGCCCG CTACGACGGG ATGCCCCGCT CGGCCATCGG CACGGGGGCG
GTCGATCTCG TGCTGCCTGC GGCCGAGATG ATCGGCGTGC TGCGCGATTT CCACGACCGC
GCCTCGGGGA TCGCGCCCAC CATCGAGAGC GACGCGGAGT TCATCGAGAA GGTGGTGCGC
AACGTGCGCT ACCGCACGGG CCACGACTTC TCCGGTTACA AGAGCGGCAC GCTCCTCAGG
CGGATCACGC TGCGCATGTC GGTGTTGGGG CTCACGGAGC CCGGCGACTA TCTGCGCGAA
CTGGTGCAGA ACCGGGGCGA GGCCGATCGG CTTTTCCGTG ACCTGCTCAT TAACGTCACC
AGCTTCTTCC GCGACCCTGC GGCCTTCGAC GCGCTGGCGC GGGTGGCGAT CCCCGGGATC
CTCGAGGAGA AGGGCCGCGG CGACGAGTTG CGGGTCTGGG TGCCGGGCTG TTCGACGGGG
CAGGAGGCCT ATACGGTCGC GATGATCCTC GCCGACGCGA TGACGCGGCT CGACGTGCGT
GCCCGGCTCT GCGTCTTCGG GACCGACATC GACGAGGATG CGCTCGCCAT CGCGCGGCGG
GCGCAATATC CCAACTCCAT CGCCTCCGAG GTGCCGCCGC AGTTTCTCGA GCGCTACTTC
ACCCCCACCC GGCACGGCTT CGAGGTGCGC GGAGAGCTGC GTGACATGGT GCGCTTCTCG
TCCCAGAGCC TCGTCAAGGA TCCGCCCTTC TCCCGCCTCG ACCTCATCAC CTGCCGCAAC
CTGCTGATCT ACTTCAATCA CGAGCTGCAG GAACTGGCGC AGCGCGTCTT CCACTACGCG
CTCCGGCCCG GCGGTTTCCT GATGCTCGGC CCCTCCGAGA CGGCCAAGGC CGAGGGCGAC
CCCTTCGTGA ATGTGGTGCC CGAGCACCGG ATCTACCGGC GCAACGATGC GCTGGCGCGT
TCGCTCGACC TGCCGCGCGG CTTCCGCAGC ATCTCGCTTG CCTCCGAGGC AACGCACGAT
GCGCTGCCCG AGCAGATCTT CGGGCTGCCC TATGCCGCGG CCGAGGCGCT GGTCGTGCGC
CATGTGCCGC CGTTCCTGCT CATCGGACCG CAGGACGAGG TGACGCGCGT GGGGGCGGGG
GCCGAGAGGT TCGTCCGTCT CAATCCCGGC ACCGCGTCGC TCGGCATCCG CGCCTTGATC
CTTCCCGAAC TCGAGCAGCC GCTGAAGCGG CTTCTGACCG GAAGCGGGCT CGCCGGCGGC
AGCTTCCGCC AGACACGGGT CGAGCTTTCC CGCGACGGAG AGGCGCAGGA GGTCACGATC
GGCTGCGAGA CCCTGTCGAA CGGTCTGCGT CTCGTGACCT TCGGCACCAT CGCCAGCCCC
TCCTCCGGCT CCGCCGCGGA CCCCGACACG CGGATCGTGC TCGACGAGGC CTATGTGAGC
CAGATCGAGG ACGAGCTCGA GGAGGCGCGC CTGATGGTGC GCACCACGGT CGAGGAACTC
GAGACCTCGA ACGAGGAGCT GAAGAGCTCG AACGAGGAAA TGATGTCGAT GAACGAGGAG
CTCCAGTCGG CGAACGAGGA GCTCTCGACC ACCAACGAGG AGCTGCAGAC CAAGCTCGCG
GAACTTGCCG AGGTCAATGC GGACCTCGCG AACTTCATGT CCTCCACCCA GATCGCGACC
GTCTTCCTCG ACCGCGAGCT GCGGTTGCGC TCCTTCACCC CCGAGGCCGC CACCTGGTTC
CGCTTCGTCG AGCAGGACCG CGGGCGCGAG ATCACCGACA TCCGCGCGCG TCTCGACATC
GGCACCATCG CCGACGTCTG CCGTCGGGTG ATGGCGGAGG GCCCGGCCGA AGAGGTGGCG
ATGGTCTCGA CCGACGGCGA GTCCGAGGTG ATCGTGCGGT TCGCTCCCTA TCGCAGCGGT
TCGGGCGATC GGGGCGGGGT CGTCTTCTCG ATCTTCGATG TGACCGCCGT CACCCGCTTC
GCCCGCGCCG CCGAGGAGGC TTCGGCCGAC GCCCGCGCCA GTGCCGAGGA AATCGAGGAA
CTCTATCTCG GCAGTCCCGG CGCGATGGGC CTCGTCGACC GCGACTTCCG CTATCTGCGC
GCCAATCCCA AGATGGCCGA TTTCAGCGGC CTGCCCAATG AGAACCTCAT CGGCCGGTCG
ATCTCGGAGG TCCATCCCGA CGTGGCGGGG CGCATGGTGG CCTCGGTCCG CCGGGTGTTC
GACAGCGGCG AGCCGGTGCT GCGGCAGGTG GTGCGCGGAA CGACGCCCGC CGATCCCGAC
GTGCCGCGCG TCTGGGAGAT CGACTGGTAT CCCGTCCATC GCTCGGACGG GGTGCGGGCC
GTGGGCTTCA ACGTCACGGA CGTGACCCGG CTTCTGGAAC TTCAGGCCGA CCTGCGCCGC
ATCATGCGCG AGCTGCAGCA CCGGGTGAAG AACATGCTCT CGAACGTGAT CGCGCTGGTC
AACCGGGCGC GCCGCGAGCA GGGCGACCCG CAGGAGATCC TCGAGACGCT GGCGCAGCGG
ATCCGGGCGC TCGCCAACAC CCACAATCTG CTCACCTCGG AAAACTGGGC CTCGACCTCG
CTCAGCGACA TCTTCGCGCT CGAGCTTCTG AACGTCTATG GCGAGGAGCG GGTGACGCTC
CGTGGCCCCG AAATGCGGCT CAATGCCCGC GCCACGCTGA GCCTCGGCAT GGTGATCCAT
GAACTCGCCA CCAACGCGTC GAAATACGGT GCCTTCTCGC GGCCAGAGGG GCGCGTGTCG
GTGCGCTGGT CGCGGGTGGA CGAGGGAGAA GGCGACGAAT TCCGTCTGGT GTGGCAGGAG
AGCGGCGGTC CGACGGTAAA TCCGCCCTCG CGCGAGGGTT TCGGCACGCA ATTGATGCGT
TCGATGGTAG AGGGCTCCTT CTACGGCAGC ATCGAGAGCA ACTGGGAACC GGCCGGTCTT
CGCCTCGTTG TGGCCCTGCC ATGGAATGCA GCAACCGAAG TGGACTATGA CAGTGACCTG
GACCCCCTCC GCCATGCGGA TCCTCTACCT TGA
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| Protein sequence | MTEMLSAAES AADRDLVLLG IGASAGGLEA FQSLLGALRP TDRFALILVQ HLDPEHESLL
PELLSKRTRL PVQSIEDGME IESGNVYLIP PAFGLDIRGR VLKLVPFEAP RGLRRPIDSF
FQALAREHGS NAAGVILSGT GSDGSNGVRA IKEAGGLVFA QDPKDARYDG MPRSAIGTGA
VDLVLPAAEM IGVLRDFHDR ASGIAPTIES DAEFIEKVVR NVRYRTGHDF SGYKSGTLLR
RITLRMSVLG LTEPGDYLRE LVQNRGEADR LFRDLLINVT SFFRDPAAFD ALARVAIPGI
LEEKGRGDEL RVWVPGCSTG QEAYTVAMIL ADAMTRLDVR ARLCVFGTDI DEDALAIARR
AQYPNSIASE VPPQFLERYF TPTRHGFEVR GELRDMVRFS SQSLVKDPPF SRLDLITCRN
LLIYFNHELQ ELAQRVFHYA LRPGGFLMLG PSETAKAEGD PFVNVVPEHR IYRRNDALAR
SLDLPRGFRS ISLASEATHD ALPEQIFGLP YAAAEALVVR HVPPFLLIGP QDEVTRVGAG
AERFVRLNPG TASLGIRALI LPELEQPLKR LLTGSGLAGG SFRQTRVELS RDGEAQEVTI
GCETLSNGLR LVTFGTIASP SSGSAADPDT RIVLDEAYVS QIEDELEEAR LMVRTTVEEL
ETSNEELKSS NEEMMSMNEE LQSANEELST TNEELQTKLA ELAEVNADLA NFMSSTQIAT
VFLDRELRLR SFTPEAATWF RFVEQDRGRE ITDIRARLDI GTIADVCRRV MAEGPAEEVA
MVSTDGESEV IVRFAPYRSG SGDRGGVVFS IFDVTAVTRF ARAAEEASAD ARASAEEIEE
LYLGSPGAMG LVDRDFRYLR ANPKMADFSG LPNENLIGRS ISEVHPDVAG RMVASVRRVF
DSGEPVLRQV VRGTTPADPD VPRVWEIDWY PVHRSDGVRA VGFNVTDVTR LLELQADLRR
IMRELQHRVK NMLSNVIALV NRARREQGDP QEILETLAQR IRALANTHNL LTSENWASTS
LSDIFALELL NVYGEERVTL RGPEMRLNAR ATLSLGMVIH ELATNASKYG AFSRPEGRVS
VRWSRVDEGE GDEFRLVWQE SGGPTVNPPS REGFGTQLMR SMVEGSFYGS IESNWEPAGL
RLVVALPWNA ATEVDYDSDL DPLRHADPLP
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