Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4605 |
Symbol | |
ID | 4025373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | - |
Start bp | 57980 |
End bp | 61258 |
Gene Length | 3279 bp |
Protein Length | 1092 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637965095 |
Product | MCP methyltransferase, CheR-type |
Protein accession | YP_572003 |
Protein GI | 92109717 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.315944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGCCTC AAGAACTGCA CGGAGAGAAA GTCGAGGGCA AACAACCAAC CCCGGATCAA TCCGGTGTGA TTGCCACTAA ACGACGTCCA CCCTCGCTGG TCGTTGGCAT CGGGGCTTCC GCCGGAGGGC TGGACGCGTT TAAGAGCTTC TTTGAAGGCG TTCCGGCTGA TACTGGCATG AGTTTTGTGC TGGTTCAGCA TCTCGACCCC AACCACAAGA GCCTTCTCGT CGAATTGCTC AGGCCGCACA CGTCCATGCG GGTCGAAGAA GCGCGGGATG GTGTCGCGCT CGCGGCAAAC CACATCTTTG TCATTCCGCC CAACGCAACG ATGACGATGG AAGGCGACCT TTTACGGGTT TCGACACCCG CGCCGGCGCG CGAGTACCGG CGGCCAATCG ACACGTTTTT CACTTCGCTC GCTGAAAATC AGCAGGAATG TGCTGTCGCC GTGGTTCTGT CCGGCGTCGG TAGCGATGGC ACTTTGGGCG TCAAGGCGAT CAAGGAAAAT GGTGGATACA CGTTTGCTCA AGCGGAGTTC AACGAGACGG CGATGAGCGG GATGCCCCGG AGCGCTGTGG CCACCGGGCT TGTCGATTGC GTGGCGCCGG TCAAGAACCT GCCTGCAAAG CGGCTCGAAC ATCAAGCACA TCTAACCAAG GTCGAAGAGC AGAAAGATTC GGAGGGCGTC CGTGATGACG TCAGGGAGAG TCTGACAACG ATTACGTCGC TGCTGCGCAA ACGTCTCAAG CATGACTTCA GTGGCTACAA GCAAAATACC ATAATCCGGC GCGTTCAACG CCGAATGCAG GTGCTCCAGA TCGAAGCCGT CCCCGCCTAC GTGGAGCGTC TAAGGCGGGA GCCTCCCGAA GCCGACGCGC TGTTTCGTGA ACTTCTCATC GGCGTGACCC AGTTTTTTCG CGATGAGTCG GCCTTCGAGG CTTTGAAGAC GGCAATTTTG CCGTCCTTGC TTGCTGCCAA ACAACCGGAC GATACGATCC GTGTTTGGGT TGCAGGATGT GCCACCGGAG AGGAGGTTTA TTCCATCGCC ATCGTGTTGA AGGAGGCCAT GGCCGAACTC AACGTCGAGC CTTCGGTCAC GATCTTTGGC ACCGATATCG ACGGCAAGGC TGTCGCCTTC GCCCGCGCCG CGCGCTACCG CAAGACCGAC GGTGTGTCTC CTGAGCGCCT GGGGCGCTGG TTCGTGAGGG AGAGGGAACA CTATTGCCCG GTCGCGACGA TACGCGAGAT GTGCGTGTTC TCCCAGCACA GCATCATCAA GGATCCACCA TTTTCCAAAC TCGATCTGGT GTCCTGCCGC AATGTGCTGA TTTACATGGA CAACGAATTT CAGCATCGCG TCATGCAGAC TTTTCACTAC GGGCTCAATC CGGGCGGCTA CCTGTTCCTG GGTCCTTCAG AAAGTGTCAG TCGCGAGATC AAGCTCTTCA CCATTATCGA CAAAAAACAT CGCATTTTGC AGCGCCAGGA TGGCGTCAGG GCCACGCTTC CCGTGGTTCA AACTGCATCA TCGTTGCGAG CGGTTGAACC AACGTGGTCT GCGGAGGTTC ACGCAGAGGA TGGCATCGAC CAGAGCGCGC GGCGCGCCAT GGATAAATAT GCGCCTGCAT ATTTTGTGAT CGACAGACAT TGCGAAGTTC TGCGTTTCTC GGGAGCGGAA ACGGGCCGTT ATCTTGAGCC ATCGCCGGGA ACGGCCACCT TAAATCTGTT CGGCATTCTG GCAAAGGCGC TGCGTTCGCA GGTTCGAAAT GCGGTGGACA CATCCTTCGC GACCCACCAG ACCGTTGTCG ATGAGACTGT GGCCGCAACC ATTGATGGAC GCTGGTACTC GGTTCAGTTG ATTGTCGAGC CCATCGTTGA GATTGCACGA TCACCGGCAT TTTTCATTGT TGCCTTTCGC GAACGCGGCC CCCTTACGAA CGGCGGTGAA GCGGGGAAGA CCGCACCGGC GGTTAGCGAT CTCGATGCAG CATCACATCA GCAGGAATTG CGGAGTTGGC AGGCCCGATA CAAGGCCGCC AGCAACGAAC TGGAAACCCA CATCGAGAAC ATGAAGTCAG TGACGGAGGA ATACCAGTCC GTCAACGAGG AATTGCAATC GTCGAATGAA GAGCTTGAAA CTGCCAAAGA AGAGATGCAG TCGGTCAACG AGGAACTTCA GACCGTCAAC AGTGAGATGC AGAGCAAGAA CGATCAGCTG AATGGAGTGA ACAATGATCT CCAGAACCTT CTCGACAGCA CCCAGATCGC GACCATCTTC CTCGACGATA ACCTACACAT TAAGAATTTC ACACCGGCCG CGATGGAGCT GTTTGCACTC CATGATTGCG ATCGTGGCCG CGCCATAACC GACATTGTTA CGTTGCTGGC TTATGACAAG CTGCGCGAGG ATGTGAGGAA AGTCCAACGC ACGCTTGCGG TCGTCGAACA GGAACTGGAC CTAAAGGATG AGAGCGCGAC GTTTATTATG CGGATACGCC CATACCGCAC GGTCAAGAAC GTCATTACAG GCGTGGTAAT CACCTTCACC GATATTACTG AGCGAAAAGC ACAGGACGAT CAACTAAGGG TGTTGATGAA GGAATTGCAG CACCGCACCA ACAATCTGTT CAGAGTGATT CAGGCGATGG CGCGTCAGAC CGCCAAGCAT AGCGCGAATT TTGCAGACTT TGAGGTCCAA TTCGGAGCGA GGATACAGGG GCTTTCGGAG TCCAATACCC TGCTTATCGG CCAGAATTGG CAAAGTGTAT CCTTGGAGAG GCTGGTGCGT ACCCAGCTCG CGCCTTTCAT TGGAACGGAT CAGGCTCGTC TCGAAATCGA TGGGCTTGCC GTATTCGTGG CAACCGAGGC CGTGCAGACC CTTGGTCTGG CGCTACATGA GTTGGCGACC AACGCGTCGA AGTACGGCGC ATTATCGGTG CCCGGCGGCA GAATCTTGCT TCAGTGGAAA TTTACCGGGG GAGATAAGAT TCCTGAAGGC TTTCGACTGG AGTGGCGAGA GCGTGGTGGT CCGACCGTTA AGCCGGCCAA GCGCAGAGGT TTCGGTCGAT TTGTCATTGA CCAGATGGTG ACCAGCTCGC TCCATGCCAC AGTTGGGATA GATCTCGCCC CGGAAGGCTT CCGCTGGACG CTCGATATGC CAGCCAGCCA AGTTCAGCGG GCGATGCCGG ATAAAGAGGG AATGAAAAAT GGCGAAAGTG GATCGGCACC GCTTTTCGAC GTTGGGATTA AAAAACCCGA GCAGAGCGAT TACCTATGA
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Protein sequence | MLPQELHGEK VEGKQPTPDQ SGVIATKRRP PSLVVGIGAS AGGLDAFKSF FEGVPADTGM SFVLVQHLDP NHKSLLVELL RPHTSMRVEE ARDGVALAAN HIFVIPPNAT MTMEGDLLRV STPAPAREYR RPIDTFFTSL AENQQECAVA VVLSGVGSDG TLGVKAIKEN GGYTFAQAEF NETAMSGMPR SAVATGLVDC VAPVKNLPAK RLEHQAHLTK VEEQKDSEGV RDDVRESLTT ITSLLRKRLK HDFSGYKQNT IIRRVQRRMQ VLQIEAVPAY VERLRREPPE ADALFRELLI GVTQFFRDES AFEALKTAIL PSLLAAKQPD DTIRVWVAGC ATGEEVYSIA IVLKEAMAEL NVEPSVTIFG TDIDGKAVAF ARAARYRKTD GVSPERLGRW FVREREHYCP VATIREMCVF SQHSIIKDPP FSKLDLVSCR NVLIYMDNEF QHRVMQTFHY GLNPGGYLFL GPSESVSREI KLFTIIDKKH RILQRQDGVR ATLPVVQTAS SLRAVEPTWS AEVHAEDGID QSARRAMDKY APAYFVIDRH CEVLRFSGAE TGRYLEPSPG TATLNLFGIL AKALRSQVRN AVDTSFATHQ TVVDETVAAT IDGRWYSVQL IVEPIVEIAR SPAFFIVAFR ERGPLTNGGE AGKTAPAVSD LDAASHQQEL RSWQARYKAA SNELETHIEN MKSVTEEYQS VNEELQSSNE ELETAKEEMQ SVNEELQTVN SEMQSKNDQL NGVNNDLQNL LDSTQIATIF LDDNLHIKNF TPAAMELFAL HDCDRGRAIT DIVTLLAYDK LREDVRKVQR TLAVVEQELD LKDESATFIM RIRPYRTVKN VITGVVITFT DITERKAQDD QLRVLMKELQ HRTNNLFRVI QAMARQTAKH SANFADFEVQ FGARIQGLSE SNTLLIGQNW QSVSLERLVR TQLAPFIGTD QARLEIDGLA VFVATEAVQT LGLALHELAT NASKYGALSV PGGRILLQWK FTGGDKIPEG FRLEWRERGG PTVKPAKRRG FGRFVIDQMV TSSLHATVGI DLAPEGFRWT LDMPASQVQR AMPDKEGMKN GESGSAPLFD VGIKKPEQSD YL
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