| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1246 |
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| Symbol | |
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| ID | 3104510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1321243 |
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| End bp | 1325379 |
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| Gene Length | 4137 bp |
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| Protein Length | 1378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170425 |
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| Product | methyltransferase CheR, putative |
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| Protein accession | YP_113709 |
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| Protein GI | 53804418 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.271052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGTG AAAAAGCCGA CGAAGGTCTC ATCGCGACCC ACCTGGTCGT CCTTCCCTGG
GATGAAGCCG AACCGGCAAG AGCTTTTTTC GAGGCGATCT CCCTAGACCG CCGTCCCGCA
TTCTTCCTCC CCGCTCTTCC CGACACAGCG TTGGCCAAAC TGGCCGAGGC GCCGCTGGCG
GTGACGATCG CCGAACCCGG CGCTCCCGTT CTGCCGTCCC ATGTGTACGT CCCTCCTTCG
GGGAAATATC TGTCCATAGA AAGCGAACGG CTGAGGCTGG ATGACGCGCC CGCCTCCGGC
CATCCGCTCG ATCATTTCCT GCACTGTCTC CCGACGGATC GCCACGGCCG GACCGCGGTC
GTGCGCCACC CCGGCGCCTC GAGCCGGGAG CGCGAGATCC TGGGCATGAT CGAACGCGCC
GGCGGCCTGG TATGCGCCGT GGCACCGTTC GAGCCCGGCG CGGACGCGCT GGAATCCGCG
GCGGAGACCA TTGCGCAAAC CGTCGAAAAC TGGCTGCGCA GAGAGGAGGG AGACGACTCA
GAAACCCTGG CGGCGATTCT CGAACTGGTT CGTAGCCGTT CCGGTGCCGA TCTCCGTGCC
TACAAAGTCC CGCCACTGCG GCGCCGCATC CAACACCGCA TGGGCATCGC CCGCGTCGAA
GACACGGCCG GTTACCTGAG ACTGCTCGAA AGCAGTGAGG ACGAACTGGA CCGCCTGGCC
GAAGATCTGT TGATCGGGGT CACCGCCTTC TTTCGCGATG CCGAGGCCTT CGCGCTGCTG
GAAACCACCG TCGTCCCGGC CATTTGCGGG GAAGGTAGAG CCGACCGACC GGTCCGCTGC
TGGATCGCTG GCTGTTCCAC CGGCGAGGAG GCCTATTCGA TCGCCATTCT CTTGACGGAA
GGATTCGAGC GCGCCGGACA ACGGCCGCGC CTGCAGATCT TCGCAACCGA CGTGGACGCC
GAGGCACTGG AATTCGCCCG CCATGGTCTG TATTCCGAAG CGGCTCTGGC GGGCGTCTCC
GAAACGCGCC TGGAGCGCTA CTTCGTCCGG GAGGGCGAAG CGTACCGCAT CTCGAAACAG
ATCAGGGAAT CGATCGTCTT CGCGCTCCAT AACCTGATCG GCGACCCGCC GTTTTCCAGG
CTCGACCTGG TGGTATGCCG CAACGTCCTG ATATACCTGA ATGCGACGAC TCAGGAGAAG
CTGCTCGAAA TCTTCCACTT CGTTCTCAAC CCCGGCGGCC ACCTGTTCCT GGGCAGTTCG
GAAAGCCTCG GCGAGGCCGC CCGCCTGTTC GACGAGGTTT CCCAACCCTG GCGGATATTC
CGGCGCAATG ACGCCGCCGC AGCGGTGCGG CCCAGCCTGC CGCTGTCTGC CCCGGCGACC
ACGGCGCGCG TCGCAGAAGG ACGGATCCTG GCCGCGGATC CCAAGGCGCA CGAAATCCAG
GAAAGGCTGT TCCGCGAACT GCTCGAACGC CACGCCCCGA CCCTGATCAT AGCGAATGCA
CGGCATGAAG TCCTCTACAC CAGCGGAAAC GTTCAATCCT ATCTGGAACT TCCCGCTGGC
GAACCCACCC TCGAGCTGTT CAGGCTCGTC AGGCCGCCGT TGCGCACCAT GCTGCGCTGC
TCGCTGGACC GGTGTGTCAG GGAGAGACGA AAGGTCGCCG CCGTGGCGAC GGGCGCCAAC
CACGCGTTCC CGCTGCCGGA AGCGGTCCGG ATCACCGTCA CTCCCCTCGC CGACGGCGAG
GTCTTCGAGC TGTTTCTGAT CGGGCTGGAG GAAGAAACGC CGGGCGATCC GGGCGCGTCC
GCGACGACCA GGACCGGGGA CGACGGCTGG CTGTTGCAGC AGCTCGAGCG GGAACTCGCG
GCGACCCGCG AGGACCTGCG GCAAACCATC GAGAAAAGCC GCCACGTGAA CGACGAACTG
CGGGCCTCGA ACGAAGAAAT CATGGCCATG AACGAGGAAC TCCAGTCGGC CAACGAAGAG
CTGGAAAGCT CGCGGGAAGA ACTGCAGTCG CTCAATGTCG AACTCACCGC CACCAACGCC
ATGCTCGACG CGAAGGTCGG AGAACTGGAA GCCACCACCA ACGACCTCAA TAATCTCCTG
GTCGGCACCG ACCTGGCGAT ACTCTTCCTC GACTGCGACC TCAACATCCG CCGCTATACA
CCCGCCTGCA ACCGGCTGAT GCACCTCATT CCCAGCGACA TCGGCCGGCC TTTCGCCGAT
ATCGTCCACC ACTTCGAAGA CGACGAACTG TTCACCGACG CAACAGACGT GCTCAGGGGC
GCAGAGCCGA AGAGCCGGGA GATCCTCGAC CAGCAGGGAG CCTGGTATCT CCGCAAGATC
CTGCCCTACC GGTCGCGGGA CAACTGCTGC GTGGAAGGAC TGGTGATCAC CTTCGGCGAA
GTAACCTCGC TGAAACAGGC GGAACACGAA CTGATCGCGC AAGCGGCGGA ACTTCGCCAG
CAGGCCGAAT TGCTGAAGCA CGCCCATGTC CTGGCGCGCG ATCTCGAAGA CCGCATCGTG
TTCTGGAACA GCTACGCCGA AAAATTCTAC GGCTGGACCA AGGACGAGGC ACTCGGCCGC
ACCTCTCACG AATTGCTGAA CAGCCGGTTT CCCCTCCCCT TGGCCACGAT CCGCCAGAAG
GTGCTGGCCG ACGGCCATTG GAAAGGCGAA CTCACCCATG TCGACCGGCA AGGCAGGGAA
AGAACCGTGG CAACCCACTG GGAACTGTAC CGGGACGCCG AGGGCGTGCC ACGCGCCATC
GTCGAAGTCA ACAACGACAT CACCGAGCGC AACAGCTTCG AGGCCCAGTT GCGGCAAAGC
CGCCACTACC TCGATTATCT GGCGTACTAC GACCCCCTGA CCCAGTTACC CAACCGCTTC
AGGTTCCAAC AGCGGCTGGA ACAGGCCGTC TCGCAGGCGC TGGCAGGCGG CAAACGGCTG
GGCCTCCTGT TTCTCGACGT CGACCGATTC AAACTCATCA ACGACAGCCT GGGCCACGAG
GTGGGCGATA GCGTCCTCCT GGAGATCAGC CGCCGCCTCG AGGAACGGCT GGGTCCAGGG
GACACCCTGG CGCGCATCGG CGGCGACGAA TTCGCCGTGC TGATGGAAGA CCTCGACGAC
ATCGGTTATG CCTCGCGCTT CGCCCTGGCG GCCATCGAGG CCGTCAAGAC ACCGGTGGTA
CTGGACCGGC ATGAGCTGTT CGTCAGTCTC AGCGGCGGCA TCAGCCTGTT TCCCGAAGAC
TCCCGCGACG CCGACGGCCT GCTCCGCAGC GCCGACGCCG CCATGTTCCT GGCCAAGGAG
AAAGGCCGCG GCAATTACGA GTTCTTCACC CCCGACCTCA ACCGGCGGGC AAACCGCCTG
CTGTCGATCG AAACCCGGTT ACGAAAAGCC CTGGAAAACG GGGAACTGGA GCTCGCCTTC
CAGCCCCAGA TGAGTCTGCA AAGCGGCGCC GTCACCGGCG CCGAAGCGCT GGCACGCTGG
AACAGCCGCG AACTGGGACG GGTCCCCGCG GACGAATTCA TCCAGGTGGC CGAGGACAGC
GGCCTGATCG TCCCGTTGGG CAAATGGGTC ATCCGAACGG TCTGCCAGAC GATCGCCGGC
TGGCAACGGT CCGGCCTGAA GCCGGTCCGC ATAGCCGTCA ACATCTCTGC GCGCCAGTTC
CGCGAGCCGA ATTTCGTCCG GCTGGTCGCC GACACTCTCA CCGAAACCGC TGTAGATCCG
ACCTTGCTGG AGCTCGAATT GACGGAGCGG TTGCTCTTGC AGGACGTGGA TACGGTCGTA
AGGACGCTGC TGGAACTCAA GCGTACCGGC GTAAGTTTTT CCATGGACGA TTTCGGCACC
GGCTATTCTT CGCTGAGCTA TCTGCGCCGT CTGCCCTTGA GCCATCTCAA GGTGGCGCGC
GAATTCGTCC CCTGGGGCGC CGACGATTGC AACAATCTTT CGATCTCCCG CGCCATCGTT
TCCCTCGCCA AAAGCCTGGA GCTGAGCTGC ACCGTCGAAG GCATAGAAAC CGAGGCGCAG
TTGGACTGCT TCAAGACCCT GGGCTGCGAC CAGGCGCAGG GTTATCTGAT CAGCCCGCCG
TTGCCGCCCG GAGAATTCGA GGATTTCCTC CGCCGCCCCC TGCCGTTCAA ACCTTGA
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| Protein sequence | MDGEKADEGL IATHLVVLPW DEAEPARAFF EAISLDRRPA FFLPALPDTA LAKLAEAPLA
VTIAEPGAPV LPSHVYVPPS GKYLSIESER LRLDDAPASG HPLDHFLHCL PTDRHGRTAV
VRHPGASSRE REILGMIERA GGLVCAVAPF EPGADALESA AETIAQTVEN WLRREEGDDS
ETLAAILELV RSRSGADLRA YKVPPLRRRI QHRMGIARVE DTAGYLRLLE SSEDELDRLA
EDLLIGVTAF FRDAEAFALL ETTVVPAICG EGRADRPVRC WIAGCSTGEE AYSIAILLTE
GFERAGQRPR LQIFATDVDA EALEFARHGL YSEAALAGVS ETRLERYFVR EGEAYRISKQ
IRESIVFALH NLIGDPPFSR LDLVVCRNVL IYLNATTQEK LLEIFHFVLN PGGHLFLGSS
ESLGEAARLF DEVSQPWRIF RRNDAAAAVR PSLPLSAPAT TARVAEGRIL AADPKAHEIQ
ERLFRELLER HAPTLIIANA RHEVLYTSGN VQSYLELPAG EPTLELFRLV RPPLRTMLRC
SLDRCVRERR KVAAVATGAN HAFPLPEAVR ITVTPLADGE VFELFLIGLE EETPGDPGAS
ATTRTGDDGW LLQQLERELA ATREDLRQTI EKSRHVNDEL RASNEEIMAM NEELQSANEE
LESSREELQS LNVELTATNA MLDAKVGELE ATTNDLNNLL VGTDLAILFL DCDLNIRRYT
PACNRLMHLI PSDIGRPFAD IVHHFEDDEL FTDATDVLRG AEPKSREILD QQGAWYLRKI
LPYRSRDNCC VEGLVITFGE VTSLKQAEHE LIAQAAELRQ QAELLKHAHV LARDLEDRIV
FWNSYAEKFY GWTKDEALGR TSHELLNSRF PLPLATIRQK VLADGHWKGE LTHVDRQGRE
RTVATHWELY RDAEGVPRAI VEVNNDITER NSFEAQLRQS RHYLDYLAYY DPLTQLPNRF
RFQQRLEQAV SQALAGGKRL GLLFLDVDRF KLINDSLGHE VGDSVLLEIS RRLEERLGPG
DTLARIGGDE FAVLMEDLDD IGYASRFALA AIEAVKTPVV LDRHELFVSL SGGISLFPED
SRDADGLLRS ADAAMFLAKE KGRGNYEFFT PDLNRRANRL LSIETRLRKA LENGELELAF
QPQMSLQSGA VTGAEALARW NSRELGRVPA DEFIQVAEDS GLIVPLGKWV IRTVCQTIAG
WQRSGLKPVR IAVNISARQF REPNFVRLVA DTLTETAVDP TLLELELTER LLLQDVDTVV
RTLLELKRTG VSFSMDDFGT GYSSLSYLRR LPLSHLKVAR EFVPWGADDC NNLSISRAIV
SLAKSLELSC TVEGIETEAQ LDCFKTLGCD QAQGYLISPP LPPGEFEDFL RRPLPFKP
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