Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1600 |
Symbol | |
ID | 6354248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1722355 |
End bp | 1725357 |
Gene Length | 3003 bp |
Protein Length | 1000 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669201 |
Product | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor |
Protein accession | YP_001943623 |
Protein GI | 189347094 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAACC CCTCATCCGG ACGTCGCCCA AAAAAAGAGT CAGAGCAAAA GAATGAAAAT ATAGTTTCGG AACTCTCTTT TCCTGTTATC GGTATCGGTG CTTCTGCTGG CGGGCTCGAG GCGATCGAGC TTTTTCTGGA ACATGTTCCG TATCCCTCGG GCATGGCCTT CGTGATTGTT CAGCATCTCG ATCCAACCCG TAAAGGGATG ATGGTCGAGC TGCTGCAGCG GGTTACTCCT ATGGCGGTTA TCCAGGTTAC CGATCGTCTT GAAATAGAGC CGGACCGTGT CTATGTCATT CCTCCCAACC ATGACATGAC GATTCTGCAC GGGGTTTTGT ATCTGCTTGC TATGGTCAAA CCCCGAGGGT TGAGATTGCC GATCGATTTC TTTTTTCGTT CCATGGCAGA CGATCTTCAG CGCCATTCTC TCGGCGTGAT TCTCTCTGGT ATGGGTTCCG ATGGAACCCT TGGCCTCCGC GCCATCAAGG AGAAGGGAGG CGGGGCTTTT GTACAGGATC CCTTATCCGC GAAGTTTGAT GGAATGCCTC GCAGCGCTAT CGATGAAGGA CTGGCTGACG TTGTGGCTCC GGTTGAAGAT CTTCCGGCTA TGATTATTGA CTACCTTAAA AACCTGACCG CTATTGTCAG ACCGACGGTT GCCCATGATG GGAGATCATT GAGCGCATTG GAAAAAATCG TCATTCTGCT GCGAACGCAA ACCGGCCATG ATTTTTCTTA TTACAAAAAA AATACAGTTT ACCGTCGTAT CGAAAGACGC ATGGGAATTC ATCAGATTGA AAAGATTTCC GATTATGTCA AGTATCTTCA GGAGAACCCA CACGAAATCG AGCTGCTTTT CAAGGAACTG CTGATCGGGG TTACAAGTTT TTTCCGGGAT CCGCCCGCAT GGGATGCTCT GAAGACGCTG GCAATTCCAT CCATTCTCGC TTCGCGTCCT TCCGGAGGCG TCCTGAGGGC ATGGGTGGCA GGTTGTTCCA CCGGAGAGGA GGCATATTCC CTCGCTATTG TTTTCCGGGA AGTTATTGCG GAGCTGAAAC CTGCCGGTAA TTTCAAGCTT CAGATATTCG CATCTGACCT GGACAAGGAT GCCATAGAGA AAGCCCGCTC AGGAATTTAT CCTTCCACTA TTTCGGATCA TGTCTCTTCT GAGCGCATCA AGCGTTTCTT TGAAAAAGAT GATCGTGGCT ACAGGATAAC AAGGGAGATT CGCGAAACAA TTGTTTTTGC GCTCCATAAT GTCATTATGG ATCCGCCTTT CACCAAGCTG GATATACTTG TCTGTCGCAA TCTGCTGATT TACATGGAGC AGGAGCTCCA GAAAAAACTG CTGCCTTTGT TCCATTACAG TCTTAATCCC GGCGGAACGC TTTTTCTGGG AAGTGCCGAA ACAGTCGGTT CCAATGCTCA TCTATTTGAT TCTATTGACA GCAAGTTCCG GCTTTTCAGG CATCATCCCC AGTTGGTAAG GCCCATTAAT GTAGATTTTC CGGCATCGTT TGCACCTTCC GTACCGGATT ACCCGGAACT TCCGGAACGC CGGTCTCCTT CGGCAATTTC CGGGATCAAC CTGCAGTATC TGACCGAACA GCTGCTACTC AGGCATTTTA CTCCCCCAGC GGTACTGACG ACCGATCAGG GTGATATCAT CTATATCAGC GGACGAACCG GAAAGTATCT GGAGCCGGCA GCAGGAAAAG CCAACCTTAA TGTTTTTGCG ATGGCCAGAG ACGGGCTTCG CTATGAGCTG AGCCTCCTTT TCAGCCGTTT GCTTCGCCAG AAAGGGAAGA TCGTCAAAAC CGGGTTGATT GTCGGAACCA ACGGCGGATC GCAGATGATC GATCTTACGG TTAAACTTAT TGAACAGCCG GATTCCCTGA AAGGAATGGT CCTGATTGTT TTTTCGGATG TGTCCAAAAA GATAACTGCG GTTGCAGAAG AACGTTCTAT TGAGCCTGGA GATGCAGGAG AAGGCAGACT CGGATCTCTT GAAGATGATC TCAAGCAGGC GAGGGATGAG ATACGTTCAC TTCGGGAAGA GATGCAGAAC TCTGAGGAAG AACTCAAATC GACAAATGAA GAGATGCGCT CAGCCAATGA AGAGCTGCAG AGCACCAATG AGGAACTGAC AACGTCCAAG GAGGAGATGC AGTCGCTGAA CGAGGAGCTG CAGACGGTCA ATCAGGAGTT GCAATCGAAG GTGAGTGATC TTTCCCAGGC CAACAATGAC ATGAAAAACC TGTTGAACAG CACGGACATC GCAACTCTTT TTCTCGATAA CGATCTCAAT ATCCGCAGGT TCACCAACCG TACGGTCAGC ATCATCAAAC TGATAGCAAC AGATATCGGC CGGCCGATAA CAGATATCGT TACCGATATG CACTATCCTG ATCTGGCTGA CGATGCGCGC GAAGTGCTTA ATACGCTCAT GTTCAGAGAA AAGCAGGTTT CGGCAATTGA CGGGCGCTGG TTTACGGTAA GGATCATGCC GTACCGTACC CAGGAAAACC GCATTGACGG TCTGGTGATA ACGTTCAATG ACATCAGTAC TGCTAAAAAG CTGGAGAAGA ATCTTCGGGA AAGCGAGCAG AGTTTTCTGT TTTTGATCAA TACCATGCCT GTCGGCACCA TGCTTCAGGA TTCGGACGGG AAGATTGTTA TGGCCAATCC GGAAGCGGAG CGGATTACCG GAATTCCGCT GGCGGAAATG CAGGGTAAAA CGGTATCAGA ACTTCGATGG AAACTTGTTC GGGAAGATGG TTCGATTTTT CCTCCTGAAG ACCATCCAGC ATTCCTCGCG ATACGTTCCG GTCAACCAGT TTCCCCTATG GTCATGGGGG TGGTTCATGC CCATGACCGG AAAATCCGAT GGGTCAAGGT CAGTGCATCG GCTCGATCAG GAGAGAGATC TGAAAAACCA TGTCAGGTCT ATACAACGTT TTTTGAAATT CCAGAAGCCG GCCGCTTTCC GGATGGTATA TAA
|
Protein sequence | MKNPSSGRRP KKESEQKNEN IVSELSFPVI GIGASAGGLE AIELFLEHVP YPSGMAFVIV QHLDPTRKGM MVELLQRVTP MAVIQVTDRL EIEPDRVYVI PPNHDMTILH GVLYLLAMVK PRGLRLPIDF FFRSMADDLQ RHSLGVILSG MGSDGTLGLR AIKEKGGGAF VQDPLSAKFD GMPRSAIDEG LADVVAPVED LPAMIIDYLK NLTAIVRPTV AHDGRSLSAL EKIVILLRTQ TGHDFSYYKK NTVYRRIERR MGIHQIEKIS DYVKYLQENP HEIELLFKEL LIGVTSFFRD PPAWDALKTL AIPSILASRP SGGVLRAWVA GCSTGEEAYS LAIVFREVIA ELKPAGNFKL QIFASDLDKD AIEKARSGIY PSTISDHVSS ERIKRFFEKD DRGYRITREI RETIVFALHN VIMDPPFTKL DILVCRNLLI YMEQELQKKL LPLFHYSLNP GGTLFLGSAE TVGSNAHLFD SIDSKFRLFR HHPQLVRPIN VDFPASFAPS VPDYPELPER RSPSAISGIN LQYLTEQLLL RHFTPPAVLT TDQGDIIYIS GRTGKYLEPA AGKANLNVFA MARDGLRYEL SLLFSRLLRQ KGKIVKTGLI VGTNGGSQMI DLTVKLIEQP DSLKGMVLIV FSDVSKKITA VAEERSIEPG DAGEGRLGSL EDDLKQARDE IRSLREEMQN SEEELKSTNE EMRSANEELQ STNEELTTSK EEMQSLNEEL QTVNQELQSK VSDLSQANND MKNLLNSTDI ATLFLDNDLN IRRFTNRTVS IIKLIATDIG RPITDIVTDM HYPDLADDAR EVLNTLMFRE KQVSAIDGRW FTVRIMPYRT QENRIDGLVI TFNDISTAKK LEKNLRESEQ SFLFLINTMP VGTMLQDSDG KIVMANPEAE RITGIPLAEM QGKTVSELRW KLVREDGSIF PPEDHPAFLA IRSGQPVSPM VMGVVHAHDR KIRWVKVSAS ARSGERSEKP CQVYTTFFEI PEAGRFPDGI
|
| |