| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0314 |
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| Symbol | |
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| ID | 3682786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 404547 |
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| End bp | 408746 |
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| Gene Length | 4200 bp |
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| Protein Length | 1399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637715642 |
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| Product | Signal transduction histidine kinase (STHK) with CheB and CheR activity |
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| Protein accession | YP_320835 |
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| Protein GI | 75906539 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA GTCCGGCGAA AAAATCTCAA TCTAATACCC CTGATGAAGA GCAGCAGGGG
AATGAAAATG AATTATTTCC TATTGTGGGC ATGGGGGCTT CTGCGGGAGG TTTAGAAGCA
TTCACAGAAT TACTCAACAA TTTGCCAAGC GATACAGGGA TGGGGTTTGT GTTGATTCAG
CACTTAGTCC CAGATCAAAA AAGTCTGTTG AGTGAGATTT TGTCTCAGAC AACTCAAATG
CCCGTGGTAG AGGTACAAAA TGGGATGGTT GTGGCACCAA ATCATGTGTA TGTGATTCCC
CCCAATACCA TGATGACCAT TTCTCAAGGA ACTTTGTACC TGAGTCCCCG TAAGAAGACT
CGCGGACAAG TGATGTCAAT TGATACTTTC TTCTTTTCCT TAGCAGAGGA CAGGGGAAAC
AAAGCTATTG CTGTGGTGTT GTCAGGGGGA GATGGCGATG GTACCAGAGG ACTGGAAGCA
ATCAAGGCGG CTGGGGGGAT TACCTTTGCT GAGTGTCAGG AATCGGCAAG AGTGAGTAGT
ATGCCCAATA CTGCCGTAGC GTCTGGTAGT GTAGACTTTA TTTTGACACC ACAAGCGATC
GCTCAAGAGT TAGCAAATAT CAGCCGTCAT CCTTATATCA AGCCAACAAC ACCAGAAAAA
TCAACTGAAG TCATACCCGA AACTGGGGAT GCGCTGCACA CAATCTTTAG TCTACTAAAA
GCTGCTACAG GTGTTGATTT TAATTACTAC AAGCAAACTA CCCTCAAGCG GCGTATCTTC
CGGCGGATGA TTTTATATAA GCTGGAAAGA TTAGAAGATT ATGTGCGTTA TCTTCAGGAA
AATCTGGCGG AAGTGAAAGC ACTGTATCAA GATGTGCTAA TCACCGTCAC CAATTTCTTC
CGAGATCCTG AAGTCTTTGA AGCTTTAAAA ACTACAGTAT TTCCGCAGAT TATTAGCAGG
GAGCAAACTC CCGACAAACC CATTCGAGTT TGGGTAGCGG GGTGTTCCAC TGGTGAGGAA
GCTTACTCCA TTGCTATCTG CTTACTGGAA TATTTGTCTA ATCAATCCAT TAATACAACT
ATACAGATTT TTGCTACGGA TATTAATGAG GTAGCAATTG AGAAAGCGAG AATCGGTATT
TACAAGCCTA GCCAAGTTTT AGATGTTTCG CCAGCACGCC TACAGCGCTT TTTTGTGCCG
GTGGAAGGTG GTTATCAAAT CAGCAAGCCA GTGCGGGAAT TGTGTGTTTT TGCCAGACAA
AATCTCATTA GCGAACCGCC ATTCTCTCGG CTCGATTTGA TTAGCTGTCG CAATGTCCTA
ATTTATCTAG GAGCAACTGT ACAGAAAAAG TTGATTCCCA TGTTCCACTA TGGGCTGAAG
TCAACGGGCT TTTTATTGCT AGGTACTTCA GAAACAGTAG GCGAGTTTAG CGATTTGTTT
GCACTAGTTG ACAGAAAGCA TAAAATTTAT TCTCGGAAAA TGGCTCCAGC TAGATTGGGG
ATGGATTTAT TAGCCAGTCA TTATCCTACA GAACCAGCAA AACCCCAACC ACCAGTCAAC
GAAGATGGTT GGAACGATTT ACAAATGCAG AAAGAGGCTG ACCGAATTGT CTTGAGTCAA
TATGCTCCAG TGGGTGTAAT TATTGATAAC GATTTGGAAA TTGTCCAGTT TCGCGGACAG
ACTAGTGCTT ATCTGCAATC ACCACCCGGT AGACCCAGCT TTAATTTGCT GAAGATGGCA
AAAGCAGAGT TAAGGCTAGA ACTACGTACT GCTATTCATC AAGCCAAAAA GCGGGGAATT
GCTGTCAAAA AAGAAGGCTT ATTAATTAAA GATAACGAGC AAGTCAAGCT GATAAAATTC
GATGTTGTGC CGTTTAAAGC CCCAGGCAGA GCAGAACGCT ATTTTTTAGT CATGTTTGCA
GAGATGCCAA CGGCAGCAAC TTCTATGTTA GGTGTAGCTG GAGATGAGAC TCGGCAGCAA
AAACAAACTA ATAACGCTCA GGAGATTAAC CAACTCAAAC AGGAGTTAGC CAGCACTAAA
GAGTATTTGC AATCAATTAT TGAAGAACAG CAAGCCACAA ATCAAGACCT AAGAGCAGCT
AACGAGGAGA TTCTTTCTAG TAACGAAGAA TTACAAAGCA CTAATGAGGA ACTAGAAACG
GCTAAAGAAG AAATTCAAGC CACCAATGAA GAATTAAACA CAATTAACGA CGAACTACAA
CGGCGCAATA TTGAATCCAC TCAGGTCAGT AATGATTTAC AAAACCTCCT CAGTAGTATA
AATATTCCTA TCCTCATGTT GGGCGGGGAT TTGCGAATTC GGCGCTTTAC CCCAACAGCA
GAGAGAATCT ATAACCTAAT TCCTACGGAT ATAGGGAGAC CATTGAGTGA TATTAATCAC
AACTTAAATA TTTCTGACTT AGAACAGCAA ATTCAAGAAG TGATAGGCAC CCTCACCTTT
AAAGTGCAAG AAGTACAAGA CAACGAGGGG CATTGGTATG ATTTACGCAT CCGTCCCTAC
CGGACAATGG ACAACAAAAT TGACGGTGCT GTTGTGGTAT TGGTTGACAT TGACGCGCTC
AAACGCAGTG CTGAACAACT GAGAGCATCC CGCGATTATG CTGAAGCCAT CGTTGATACG
ATGCGGGAAT CTTTGGTGGT GCTGGATCTA AATTTACGGG TAGTGCGGGC TAATCGCTCT
TTCTACGAGA CATTCCAGAT TCAGCCTACA GAAACAGAAC AACGCCTGAT ATTTGACATA
GGTAATGGAC GATGGAATAT TCCCCAATTG CGATCGCTCT TAGAAGAGAT TCCGCCCAAT
ATTACCCCAT TTCAAGATAT TGAAGTAGGG CATAACTTCG AGCAACTGGG ATACAAAACT
TTACGGCTCA ATGCCCGAAA AATGCCCCAA ATCGATGATA CGCAGTTAAT TTTGCTGCTC
ATTGAAGATA TCACTCAACA AAAGCAATTA GAAGCAGAAC GGACTCAATT ACTCGCTCAA
GAGCATTCAG CCCGTGAGGC AGCAGAGACA GCCAACCGCG CCAAAGATGA GTTTTTATCA
ATTCTCTCCC ATGAGTTGCG AAATCCCCTC AATACCATAC TTGGTTGGGC TAGTTTGCTC
AGCACCCACC AGTTGGAAGC AGATACAGTT AACCAAGGGT TAGAGGCTAT TGAGCGCAGC
GCTCAAGCTC AAGCCCACCT CATCAGTGAT TTGTTAGATG TTTCCCGCAT TAGCTCTGGT
AGACTGCGGA TGGATGCCCA GCCAATTGAA CTGATACCAA TAATTGAAGC AGCGATCGCC
GTCGTCCGTC TAGCAGCAGA AGCTAAAAAC ATTCACATTG AAACCCAGTT AGACCCCACA
CAAAAAACCA TAGTAGGTGA TCCAATTCGC TTACAGCAGG TGATTTGGAA TTTACTTTCT
AACGCCATCA AGTTCACCCC AGTCAGAGGC AGAATTGATA TCACACTAGA GTACACTGAC
TTCCACGCGC AAATTCAAAT CAGTGATACT GGTCAAGGTA TCAGCCCTGA CTTTCTCCCC
TTTATTTTTG AACGCTTCCG CCAAGCTGAT GGCAGCAGAA CCCGCTCCAA CACTGGCTTA
GGATTAGGGC TTTCCATTGT CCGCCACTTA GTAGAACTCC ACGGCGGTAC AGTGGCAGCG
CAAAGCCCAG GTGAAGGGCT AGGAGCAACC TTTACAATTC GCCTACCCCT ACAAACTACC
GAAGGCGGGA CATCTGTACT TAACACCAGC GATTCCTTAG CTTCCACAAA CAAAACCGAA
TTATCAACCG AAAACATTGC CTCTCTCGCA GGGCTGCGGG TTCTTGTGGT CGATGACGAA
CCAGATATAC GTCTGTTATT CAAATTAGTA CTGGAAGAAT ACGGTGTGGA AGTGGCAACA
GTTGGTTCAG CCAGTGCCGC ACTGTCAACC CTGACGGGAA ACCCCAACGG CTATGACATC
CTTCTATCTG ACATCGGTTT ACCGGGAGAA GACGGTTATG CACTGATTCG CAATGTCAGA
GCGCTGAGTC CAGAACTTGG GGGTCAGATT CCCGCCGCCG CCCTGACAGC TTATGCTGGC
TATGCAGAAT ATGCACAGGC TTTAGCAGCA GGTTTTCAAA TGCACCTTGC TAAACCCGTC
GAACCATATC AATTAGTGTC TTTAGTGGCT TCCTTGGCTG TAGGGGTTAG GGGGGTGTAG
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| Protein sequence | MNSSPAKKSQ SNTPDEEQQG NENELFPIVG MGASAGGLEA FTELLNNLPS DTGMGFVLIQ
HLVPDQKSLL SEILSQTTQM PVVEVQNGMV VAPNHVYVIP PNTMMTISQG TLYLSPRKKT
RGQVMSIDTF FFSLAEDRGN KAIAVVLSGG DGDGTRGLEA IKAAGGITFA ECQESARVSS
MPNTAVASGS VDFILTPQAI AQELANISRH PYIKPTTPEK STEVIPETGD ALHTIFSLLK
AATGVDFNYY KQTTLKRRIF RRMILYKLER LEDYVRYLQE NLAEVKALYQ DVLITVTNFF
RDPEVFEALK TTVFPQIISR EQTPDKPIRV WVAGCSTGEE AYSIAICLLE YLSNQSINTT
IQIFATDINE VAIEKARIGI YKPSQVLDVS PARLQRFFVP VEGGYQISKP VRELCVFARQ
NLISEPPFSR LDLISCRNVL IYLGATVQKK LIPMFHYGLK STGFLLLGTS ETVGEFSDLF
ALVDRKHKIY SRKMAPARLG MDLLASHYPT EPAKPQPPVN EDGWNDLQMQ KEADRIVLSQ
YAPVGVIIDN DLEIVQFRGQ TSAYLQSPPG RPSFNLLKMA KAELRLELRT AIHQAKKRGI
AVKKEGLLIK DNEQVKLIKF DVVPFKAPGR AERYFLVMFA EMPTAATSML GVAGDETRQQ
KQTNNAQEIN QLKQELASTK EYLQSIIEEQ QATNQDLRAA NEEILSSNEE LQSTNEELET
AKEEIQATNE ELNTINDELQ RRNIESTQVS NDLQNLLSSI NIPILMLGGD LRIRRFTPTA
ERIYNLIPTD IGRPLSDINH NLNISDLEQQ IQEVIGTLTF KVQEVQDNEG HWYDLRIRPY
RTMDNKIDGA VVVLVDIDAL KRSAEQLRAS RDYAEAIVDT MRESLVVLDL NLRVVRANRS
FYETFQIQPT ETEQRLIFDI GNGRWNIPQL RSLLEEIPPN ITPFQDIEVG HNFEQLGYKT
LRLNARKMPQ IDDTQLILLL IEDITQQKQL EAERTQLLAQ EHSAREAAET ANRAKDEFLS
ILSHELRNPL NTILGWASLL STHQLEADTV NQGLEAIERS AQAQAHLISD LLDVSRISSG
RLRMDAQPIE LIPIIEAAIA VVRLAAEAKN IHIETQLDPT QKTIVGDPIR LQQVIWNLLS
NAIKFTPVRG RIDITLEYTD FHAQIQISDT GQGISPDFLP FIFERFRQAD GSRTRSNTGL
GLGLSIVRHL VELHGGTVAA QSPGEGLGAT FTIRLPLQTT EGGTSVLNTS DSLASTNKTE
LSTENIASLA GLRVLVVDDE PDIRLLFKLV LEEYGVEVAT VGSASAALST LTGNPNGYDI
LLSDIGLPGE DGYALIRNVR ALSPELGGQI PAAALTAYAG YAEYAQALAA GFQMHLAKPV
EPYQLVSLVA SLAVGVRGV
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