More than 300 homologs were found in PanDaTox collection
for query gene Smed_5776 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  42.53 
 
 
1404 aa  681    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39 
 
 
1190 aa  734    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  44.89 
 
 
1384 aa  735    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  40.37 
 
 
980 aa  677    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  51.35 
 
 
1222 aa  848    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  41.68 
 
 
1218 aa  685    Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  38.74 
 
 
1361 aa  737    Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  40.47 
 
 
1371 aa  713    Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  100 
 
 
1160 aa  2355    Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  40.35 
 
 
1380 aa  699    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  38.14 
 
 
998 aa  644    Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  42.38 
 
 
1535 aa  699    Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  40.65 
 
 
1408 aa  706    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  42.56 
 
 
1274 aa  667    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  69.23 
 
 
1167 aa  1590    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  39.24 
 
 
1035 aa  630  1e-179  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.15 
 
 
1008 aa  626  1e-178  Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.43 
 
 
1168 aa  619  1e-176  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.96 
 
 
993 aa  617  1e-175  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  38.52 
 
 
1008 aa  618  1e-175  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  36.11 
 
 
1170 aa  611  1e-173  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.15 
 
 
887 aa  609  1e-173  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  36.11 
 
 
1170 aa  611  1e-173  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.35 
 
 
1163 aa  611  1e-173  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.88 
 
 
1138 aa  608  9.999999999999999e-173  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.54 
 
 
1000 aa  605  1.0000000000000001e-171  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.08 
 
 
971 aa  593  1e-168  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  38.41 
 
 
879 aa  582  1e-164  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  38.61 
 
 
868 aa  577  1.0000000000000001e-163  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  40.26 
 
 
877 aa  577  1.0000000000000001e-163  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  39.48 
 
 
1027 aa  575  1.0000000000000001e-162  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  40.94 
 
 
1279 aa  573  1.0000000000000001e-162  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  40.54 
 
 
1092 aa  575  1.0000000000000001e-162  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  36.79 
 
 
1006 aa  574  1.0000000000000001e-162  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  33.95 
 
 
1149 aa  572  1e-161  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  34.65 
 
 
1165 aa  571  1e-161  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  40.71 
 
 
1242 aa  567  1e-160  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  40.95 
 
 
1233 aa  568  1e-160  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  37.85 
 
 
840 aa  568  1e-160  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  40.6 
 
 
856 aa  559  1e-157  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  37.5 
 
 
840 aa  556  1e-156  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  34.64 
 
 
1348 aa  551  1e-155  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.42 
 
 
1324 aa  553  1e-155  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  38.13 
 
 
1483 aa  546  1e-154  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.85 
 
 
1061 aa  548  1e-154  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  36.98 
 
 
1344 aa  546  1e-154  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  33.74 
 
 
1215 aa  545  1e-153  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.3 
 
 
1158 aa  540  9.999999999999999e-153  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  39.52 
 
 
1045 aa  540  9.999999999999999e-153  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  33.24 
 
 
1399 aa  531  1e-149  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.05 
 
 
1063 aa  527  1e-148  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  32.46 
 
 
1407 aa  528  1e-148  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  36.63 
 
 
1303 aa  517  1.0000000000000001e-145  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.27 
 
 
1120 aa  510  1e-143  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.78 
 
 
852 aa  509  9.999999999999999e-143  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  38.37 
 
 
1445 aa  504  1e-141  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  32.2 
 
 
1337 aa  488  1e-136  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  33.96 
 
 
1200 aa  484  1e-135  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  36.85 
 
 
1453 aa  479  1e-133  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  33.65 
 
 
1010 aa  473  1e-132  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  34.1 
 
 
1499 aa  473  1e-132  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  36.11 
 
 
1759 aa  461  9.999999999999999e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  33.69 
 
 
820 aa  459  1e-127  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  35.73 
 
 
1306 aa  457  1e-127  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  36.75 
 
 
853 aa  458  1e-127  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  35.25 
 
 
1698 aa  447  1.0000000000000001e-124  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  36.48 
 
 
2468 aa  445  1e-123  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  32.8 
 
 
1418 aa  441  9.999999999999999e-123  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  33.65 
 
 
1618 aa  432  1e-119  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  32.81 
 
 
1378 aa  423  1e-116  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  33.45 
 
 
1220 aa  411  1e-113  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  33.53 
 
 
1214 aa  407  1.0000000000000001e-112  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  34.9 
 
 
1535 aa  407  1.0000000000000001e-112  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  30.78 
 
 
823 aa  369  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  29.57 
 
 
1248 aa  368  1e-100  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  39.45 
 
 
617 aa  367  1e-100  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  31.9 
 
 
837 aa  365  2e-99  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  37.3 
 
 
639 aa  364  4e-99  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  31.66 
 
 
1089 aa  363  1e-98  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  39.37 
 
 
629 aa  363  1e-98  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  33.25 
 
 
824 aa  362  2e-98  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  33.93 
 
 
1084 aa  339  9.999999999999999e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  30.48 
 
 
813 aa  335  3e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.41 
 
 
1193 aa  335  4e-90  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  38.38 
 
 
604 aa  319  2e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  42.61 
 
 
432 aa  317  6e-85  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.32 
 
 
1110 aa  315  2.9999999999999996e-84  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.73 
 
 
1303 aa  273  1e-71  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  28.48 
 
 
631 aa  256  1.0000000000000001e-66  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  28 
 
 
2031 aa  250  1e-64  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.54 
 
 
617 aa  235  4.0000000000000004e-60  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_007961  Nham_4618  signal transduction histidine kinase  34.64 
 
 
454 aa  223  9.999999999999999e-57  Nitrobacter hamburgensis X14  Bacteria  normal  0.723174  n/a   
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  30.63 
 
 
618 aa  221  5e-56  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009620  Smed_4932  signal transduction histidine kinase  35.29 
 
 
907 aa  198  5.000000000000001e-49  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.752686 
 
 
-
 
NC_011894  Mnod_0965  signal transduction histidine kinase  36.41 
 
 
850 aa  184  9.000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2344  signal transduction histidine kinase  35.88 
 
 
500 aa  178  5e-43  Sinorhizobium medicae WSM419  Bacteria  hitchhiker  0.00211814  normal 
 
 
-
 
NC_010172  Mext_1888  PAS sensor protein  37.06 
 
 
326 aa  177  9.999999999999999e-43  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2090  signal transduction histidine kinase  35.54 
 
 
372 aa  176  1.9999999999999998e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.893944 
 
 
-
 
NC_010511  M446_2563  signal transduction histidine kinase  36.66 
 
 
409 aa  176  1.9999999999999998e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0167  signal transduction histidine kinase  37.28 
 
 
336 aa  176  2.9999999999999996e-42  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
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