| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2344 |
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| Symbol | |
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| ID | 5323205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2420305 |
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| End bp | 2421807 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791282 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001328011 |
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| Protein GI | 150397544 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00211814 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAAA AGACAGAGGC GATGCTCCCA GCCGTAGCGC AGGTGCTCGA TGCGCCGGAA
CGGCTCGGCG TTCTTCAGGC CGCGGTGCCG GACATGTCGA TCCCAGACGG GGATTTCGAC
GGGCTTGCGG GGCTTGCGGC CAGCCTTTTC GATGCGCCGG TCGCCCTCAT CACCCTCGTG
GACCACGAAT GGCAGTGGTT CAAGGCTTCC GTCGGCACGG CGGAAACGCG GCTGCACGTT
CGTGAGTCGT TCTGCGTCCA TACGATCGCA GAAGGCGACG GCGCCTTTGT CGTGCTCGAT
GCCTCTCGCC ACCCGGCGTT CAGACAGCGT CGGGCGGTCG CCGGCCCGCC CTCCGTGCGC
TTCTATGCGG GCGCCCCGAT CATTCTGGAC GGGCAGGCGA TAGGAACAGT CGCGGTCGTC
GACGTCGCTC CCCGTTTCGA GATATCCGTC AAGCAGCAAG GCGAGCTGCA GCGCATCGCA
GGCGTCGCCG CCTCGCTGTT CAAACTGAAG GACGAAACAC GCCGGCGTGC GCTCAAGGAG
GCCGCGCTTT CCCGCGAAGA GCAGCGGCTT GCCATGGCGC TCGATGCGGC CAATGTCGGC
AGCTGGCTCT GGGACATTCG GGCCGGCACG GTTTCGGGCA ACGGCGCAAT GATGCGCATG
TTCGGCCTTC CGCCAGAACG CACCGTTGGC GCCAAGGCCA TATTTTCCGC CATCCATCCC
GACGATCGCA TGCCGACCTT CTCGAAACTT CGCCAGGCGA TGGCTGCCAA TGAGGAATAT
GACGGCATGT TTCGCATCGG CACCAATGGA AGGTGGCTGC TTGGCCGCGG CCGTGTGCAC
GACCGCGACA GCAAGGGTGC ACCCTTGAGC TTTCTCGGCA TGACGATCGA TGTTTCGGAG
CAGCAGGCGT CGGTGAACCG CACGCGGCTG CTGCTGAAGG AACTGAACCA CCGGGTCAAG
AACACGCTGG CAATGCTCCA GTCACTCGCC CGCCAGACGC TTCGCCAGAC GAGCGACCCG
GCCGAATTCA TGACCGCCTT CGCCGGCAGG CTTCAGGCGA TCTCCGAGGC GCATGGGCTC
CTTTCCGATT ACGAATGGGG CACGATCCAC CTGTCCGAAC TGATTTCGAA ACAGTTGCTG
CCCTATGTCA GCGATTACTC CCAACAGATC GAATTGCACA AGGATGAGAT CCTGCTTGGT
CCGGACCAGG CCGTGGGGCT CGGGCTGGTT CTGCACGAAC TGGCGACCAA TGCCGTAAAA
TACGGCGCTC TCTCGCTGCC GACGGGAAAA ATCGTGCTGA CGGCCCGCCG CTTAATCGAG
GACGGAGAAT CCGTGTTGCA TCTGACCTGG ACTGAAGTGG GCGGCCCCCC GATTCGCGAG
CCGCGCCGCC GCGGTTTCGG ATCTATCCTG ATCGAACGCA GCCTCGACAA GATCATCGGC
AGCTCGGTCA AGGTAGAATA TCTGCCGGCG GGAGTCACCG CGTTGATCCG GCTGCCGCTT
TGA
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| Protein sequence | MHEKTEAMLP AVAQVLDAPE RLGVLQAAVP DMSIPDGDFD GLAGLAASLF DAPVALITLV
DHEWQWFKAS VGTAETRLHV RESFCVHTIA EGDGAFVVLD ASRHPAFRQR RAVAGPPSVR
FYAGAPIILD GQAIGTVAVV DVAPRFEISV KQQGELQRIA GVAASLFKLK DETRRRALKE
AALSREEQRL AMALDAANVG SWLWDIRAGT VSGNGAMMRM FGLPPERTVG AKAIFSAIHP
DDRMPTFSKL RQAMAANEEY DGMFRIGTNG RWLLGRGRVH DRDSKGAPLS FLGMTIDVSE
QQASVNRTRL LLKELNHRVK NTLAMLQSLA RQTLRQTSDP AEFMTAFAGR LQAISEAHGL
LSDYEWGTIH LSELISKQLL PYVSDYSQQI ELHKDEILLG PDQAVGLGLV LHELATNAVK
YGALSLPTGK IVLTARRLIE DGESVLHLTW TEVGGPPIRE PRRRGFGSIL IERSLDKIIG
SSVKVEYLPA GVTALIRLPL
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