| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0563 |
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| Symbol | |
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| ID | 3747510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 666254 |
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| End bp | 669361 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637773097 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_378879 |
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| Protein GI | 78188541 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTG TTGGTGGAAT TGCTTATATC AAGGTAACAA GAGTGAGCTA TCAGTTATGG
GAAGCCGTAG AGAATAGCTC TAAACATTAT AACGGAATAA TCATGCAAAA AAAGCGACCA
AGTTCCTCCA GCAAGGCAAC GCCTTCAACA AATGTGTTGA TACACAGCAA CCAAACAAAA
ATCCCTATTG TGGGCATTGG GGCATCGGCA GGTGGACTTG AGGCGTTAGA GGCTTTTTTG
CGCAACATCC CCGACAAGTG TGGAGCGGCA TTTGTTATTG TGCAACACCT TGATCCCACC
TATAAAGATA TTATGGTGGA ACTGTTGCAG CGAATTTCCA CCATACCAGT GCTGCAAATT
GCTGACAGAA TGGTGGTTGA AGCGAACCAT GTGTATGTTA TTCCACCAAA TAAAAATTTA
TCGCTGTTAC ATGGCGTGTT GCATTTGCTT GACCATGTTG AACCGCGTGG TTTGCGCCTG
CCAATAGACT TTTTTTTTCA ATCGCTTGCG GCTGATCTTG AAGAGCGTAG CGTCGGTGTT
ATTCTTTCGG GTATGGGTTC GGATGGCATG TTAGGTTTAC GAGCAATCAA GGAAAAACGA
GGAGGCACCT TTGTGCAAGC CCCAAACTCT GCAAAGTTTG AGGGTATGCC GCGTAGTGCC
ATTGATGGAT GCCAGCCCGA TGGAGTGGCA TCTGCCGATA AACTCCCCGA ACTCATTCTT
GCCTATCTTT CGCATGGGCA TTCGCCGCTA CGTGGAGAGC AGCCATTAGC CGAAAAGGTG
ATGAGCGGCT TGGAAAAGGT GGTGATTTTG TTGCGTACGC AAACAGGGCA AGATTTTTCG
CTCTATAAAA AAAGCACCAT TTATCGCCGC ATTGAGCGCC GCATGGGCAT TCACCAAATA
GAGCGCATTG CCGATTACGT TCATTTTCTG CAAGAGAATC CGCATGAAAT TGAGCTTCTC
TTTAAAGAGC TGCTTATTGG CGTTACAAAC TTTTTTCGCG ATCCCGTAGC TTGGGAGGTA
CTCAAATGCA AGGTATTTCC ATTGCTTTTT GCCGCAAAGC CTGTGGGTGG TGTTTTGCGA
GCTTGGGTGG TGGGTTGCTC AACGGGCGAA GAGGCATATT CGCTTGCAAT AGTGTTTCGA
GAAGTATTGG AGAGCATAAA GCCGTTGGGG AATATTCGCT TGCAAATTTT TGCAACCGAT
CTTGATAACG ATGCTATTGA CCGAGCACGC AGCGGTTGTT TTCCGCTTAC CATTGCGAAT
GATGTTTCGG CTGAACGGTT ACAACGTTTT TTTGAGCGTG ATGATCATGG CTATAAAATT
GTGCGCTCCA TTCGCGAAAC GGTTGTGTTT GCCCCACAAA ACGTCATTAT GGATCCACCA
TTTACGCGTC TCGATATATT GGTCTGCCGC AATTTGCTGA TTTATATGGA GCCTGAATTA
CAAAAAAAGC TCTTTCCTCT CTTTCATTAT AGCCTCAATA TTGGTGGTGT TCTTTTTTTA
GGGAGTGCCG AAAGTTTAGG TTCATTTCAT CAGCTCTTTA AACCAATTGA GGCAAAAGCA
CGGCTGTTTA TGAAACTGCA AGGAATTCGT TCCGAGCCGT TAGCTTTGCC GTTGTCGTAT
GCCCATAATA CGCCATCCAT TCTCTCAGAT GAAGTAGGAG CTCAACCCAA AGCATCAACG
GGAGTGCTTA ATTTACAAGT GTTGACTGAG CAAGTATTGC TTGAACACTA TACCCCACCA
GCCGTGCTCA CCAACGATAA GGGCGATATT GTGTACATCA GCGGTCATAC GGGCAAATAT
CTTGAACCAG CGGCAGGTAA AGCAAATTGG AATATTTTCG CAATGGCACG CGATGGCATT
CGTTATGAGC TCAATTTGAT TTTTAGCAGC GTGCTTCGTA AGCAAGGATC GGTTACCAAA
AAAGGCATTC CTGTTAGTTT GAGTGAGGGA TCGCAGCGAA TCAATTTAAC GATTCGGTTA
CTTGATAAGC CTGAGGCATT GCGTGGTTTG GTGCTCATTG TGTTTGAGGA TGACGAAAAT
GTTACGGTAA CAACAGACAC AACGGAGCAG CTTTCACTTG CAAGTGGTGA AAACCGTATG
GTGCTGTTGG AACAGGAATT AAGTCAGGCA CGCGATGAAA TTCTCATTAT TCGCGAAGAG
ATGCAAACCT CGCAAGAAGA GCTGAAATCC ACCAATGAAG AGATGCAGTC GGCAAATGAG
GAGTTGCAAA GCACCAACGA AGAGCTAACC ACCTCGAAAG AGGAGATGCA ATCCATGAAT
GAGGAGTTGC AAACCATTAA CCATGAGCTG CAATCGAAGG TGAGCGACTT GTCGCAAGCA
AATAACGACA TGAAAAATCT GCTCAATAGC ACCGATATTG CCACCCTCTT TCTTGACGAT
GCATTAAACA TCCGCCGCTT TACCACCCGC ACCGCCTCTC TTATTAAGCT TATTGCTACC
GATGTAGGAC GCCCCATTAC CGACATTGTT ACCGATTTGC ACTATCCTAC GCTTGTTGAC
GATGCACGCG AAGTGTTGCA AAGCCTTGTG TTTAGCGAAA AAGAGGTTTC TGCCAGCAAT
GACCGTTGGT TTAGCGTTCG TATTATGCCC TACCGCACGC AAGAAAATAG AATTGTGGGA
TTGGTGATTA CCTTTAGCGA TATTAGCATG GCTAAAAAGT TAGAAGGAAA TCTTCGCGAA
AGCGAAAACC GCTTCCGCTT TTTCTACAAC AGTTCACCGT ATGGGGTGCT TTTTTTTGAT
AGGGAGGGAA AAATCACGCA GGCTAACCCC GAAGCTGAAA AATTGCTGGG CTACTCGTTA
GTAGAAATGG TGGGCAAAAA CGTTGCCACG CTCAATTGGC AAATGCTCCG TGAAGATGGT
TCCACCATGC CGTTAACCGA TTTTCCTGTA ACGGTTGCCT TACAAACCGC AAAGCCTGTA
ACAGAAACGG TTGTGGGAAT TGTTCAAGAA CGCACGCAGT ATTGCCGTTG GCTCACCTTA
CGTGCCGTTC CCCGTATTGA AGATGGAAGT AGTAGCCCCT GTGAAGTTTT TATGACGTGC
CATGAGCGAG ATGCTGTTTC GCATTGCCAC GACTCTTGTA ACCCTTAG
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| Protein sequence | MIFVGGIAYI KVTRVSYQLW EAVENSSKHY NGIIMQKKRP SSSSKATPST NVLIHSNQTK
IPIVGIGASA GGLEALEAFL RNIPDKCGAA FVIVQHLDPT YKDIMVELLQ RISTIPVLQI
ADRMVVEANH VYVIPPNKNL SLLHGVLHLL DHVEPRGLRL PIDFFFQSLA ADLEERSVGV
ILSGMGSDGM LGLRAIKEKR GGTFVQAPNS AKFEGMPRSA IDGCQPDGVA SADKLPELIL
AYLSHGHSPL RGEQPLAEKV MSGLEKVVIL LRTQTGQDFS LYKKSTIYRR IERRMGIHQI
ERIADYVHFL QENPHEIELL FKELLIGVTN FFRDPVAWEV LKCKVFPLLF AAKPVGGVLR
AWVVGCSTGE EAYSLAIVFR EVLESIKPLG NIRLQIFATD LDNDAIDRAR SGCFPLTIAN
DVSAERLQRF FERDDHGYKI VRSIRETVVF APQNVIMDPP FTRLDILVCR NLLIYMEPEL
QKKLFPLFHY SLNIGGVLFL GSAESLGSFH QLFKPIEAKA RLFMKLQGIR SEPLALPLSY
AHNTPSILSD EVGAQPKAST GVLNLQVLTE QVLLEHYTPP AVLTNDKGDI VYISGHTGKY
LEPAAGKANW NIFAMARDGI RYELNLIFSS VLRKQGSVTK KGIPVSLSEG SQRINLTIRL
LDKPEALRGL VLIVFEDDEN VTVTTDTTEQ LSLASGENRM VLLEQELSQA RDEILIIREE
MQTSQEELKS TNEEMQSANE ELQSTNEELT TSKEEMQSMN EELQTINHEL QSKVSDLSQA
NNDMKNLLNS TDIATLFLDD ALNIRRFTTR TASLIKLIAT DVGRPITDIV TDLHYPTLVD
DAREVLQSLV FSEKEVSASN DRWFSVRIMP YRTQENRIVG LVITFSDISM AKKLEGNLRE
SENRFRFFYN SSPYGVLFFD REGKITQANP EAEKLLGYSL VEMVGKNVAT LNWQMLREDG
STMPLTDFPV TVALQTAKPV TETVVGIVQE RTQYCRWLTL RAVPRIEDGS SSPCEVFMTC
HERDAVSHCH DSCNP
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