Gene Hhal_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1716 
Symbol 
ID4710200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1879790 
End bp1882360 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content65% 
IMG OID639856184 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_001003282 
Protein GI121998495 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.92135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCAC CGACTGACCG CCGCCCACTG GACCCCTTAC CGATCCCGAT CGTAGCGATC 
GGCGGGTCGG CTGGATCCCT CAAGCCCCTG CAGGCTTTCC TGGCCCACCT GCCGACGGAC
TCGGGGGCAG CCTACGTCAT CATCACTCAC CACCCCAGCG GTCAGCGAAG CCTGCTCCCC
GAGATCTTGG AGCGGCAGAC GGAGCTGCCC GTGCAGATGG TCGAAGAGGG GGAGACCCTG
GGCCCGGACC GCATCTACAT TGCCCTGCCG GAGGACGGCT GGGCCCTCCG GCAGGGGCAG
CTGATCCGGT CGCGAGCAAC GGAAACGCGC CCTGGAGGTG GCGCCCCCTA TCCCATTGAT
GCCTTTTTCC GCTCCCTCGC CGAGGAGGCG GGACAGGGTG GACTGGCCGT TGTCCTGTCC
GGCACGGGTA GTGACGGCAC CCTTGGGGTC AAGGCCATCA AGTCCCAGTC GGGCATGGTT
ATGGCTCAGG ATCCGAAGAC CGCTGAGTTC GGCGACATGC CGGCCAATGC CATCGCCACG
GGGCAGGTGG ACTACGTGCT AGCCCCGGCG GATATGCCTG CGACCCTGGT CGGTTATCTC
GGGGCCCGCA GCGAGCGCCA GGGTGCGCCG TCGAGTCGTC GCCGCACGAT CCCCGAAGAG
GTTCTGGGCC CGATCCTTCG ACAAGTCAGG CACTGCACCG GTCACGATTT CTCGGGTTAC
AAGACCAGCA CGCTCGAGCG GCGCCTGGAG CGGCGCATGG ACCTCTTGCA GATTTCCGAT
CCGCGCGCCT ACTCGATCCA CCTGCAGTCC CATCCCGAGG AACTCAACCG CCTGTTCCAG
GATTTCCTGA TCAGTGTCAC CAATTTCTTC CGGGATCCCC GGGCCTGGGC CACCCTGTCG
GAGGAACTGC TACCAGGCAT GCTGCGGCGA GCCGCGCACA GGGGGGGCGA GTTCCGGGCC
TGGGTGGTGG GCTGTGCCAC CGGCGAGGAG GCCTACACCC TGGCCATTCT CATCCGGGAA
TGCCTAGCGG ATTGGGAACA GGCCCCGGAG GTGCGGATCT TCGCCACCGA TGTCGATCAG
GCTGCCATCG AGACGGCCCG AGTGGGGCGT TATCCGGCCG GCATTGCCGA CGACCTCACC
CACCAGCGTT TGCGGAGGTA TTTCGCCGCT GAGAACGATA CCTACCGGAT CGTCCGGGAA
GTGCGGGACA TGGTGATCTT TGCCGACCAC AATGCGCTGC AGGATCCGCC GTTCACCCAC
ATGGATCTGA TAACCTGCCG TAACCTTCTG ATTTACCTGG AACGGGACCA TCAGATGCGC
CTCCTGGCCC TGTTCCGCTA CGCCCTGCGT GACCGCGGGC TCCTCTTCCT GGGGCCTTCC
GAGAGTCCGG ATCAGGCGAG CGAAGCCTTC GAGGTTGAGG CCAAAGAGGA TCGGATCTAC
CGGGTGGCCG AAGATGCGGC ACGGACCAAC CTGCTTGACA TGCCCGGACC CCGCCGCTTT
GCGCGCAGCC TGCCGGTGCA GAGTACAGCC GCGCCCGCGG CGAACAGTGA CGGGGAGGGT
TTCTCCCACC ACGTGGAACG TCTCCTTGCC CTGCGGTTTG CGCCACCGTC AGTGGTGGTC
AACGACCGCG GCGAGGTGGC GTACATCCAC GGGCGCACCG GTCGCTTCCT GGAGCCCGCT
CACGGCCCGG TCCAGAACCA ACTGGTGGAG ATGGCGCGGC CCGGGCTGCG GGCTCCGCTG
AGCCAAGCCC TGGAGGAGGT GGCGCGTGGC CGGGCAGAAG AGGTGGGCCA GAGGGTTCAG
ATCCAGACCG ACGATGATGC CGATCCGGAG TGGCTCCGGT TTGAAGTCCG CCGCATCCAC
ACGCCTGCCG CCTTGAAGGG GTTTCGCCTC GTGACCTTGT ATTCGGAGGC GGGTACGGAG
GTGGCGTCCC TTGGGGTGGA GCTTGAGCCG AGATCCGAGT CGGAGGCGGA GTCCGAGGGT
CCAGGGACTG AGGCCGAGCG GCGTTTGAGG CGAGAGCTGG AAAACGCCCG CCAGGATAAG
CAGGTAGCGG TCAATGAGAT GCAGTCTACC AATGAAGAGC TCCAATCCAT GAATGAGGAG
CTTCAGTCGA TGAATGAGGA GCTCCAGAGC AGCAACGAGG AACTGGAGGT CGCCAAGGAG
GAGGTGGAGT CGCTCAACCA AGAGCTGCGC AGCGTCAACG CCGAACTCCA GGTCCGGGTG
GACGACCTGA CCGAGACCAA CGACGACCTC AAGAACCTTC TGGACAGCAC GCACATCGCT
ACGCTGTTTC TGGACGAAGC CCTGAATATC AAACGCTTTA CGACCCCTGT GCAGGAGCTG
ATCGCCGTGC GCCCGGCGGA CATCGGCCGG CCGGTGGCCG ATCTGAAGAC CAGCTTGCGG
TATGACGGCC TAGTGGCGGA TGCCGAGTCC GTTCTCGACA CCCTGATCCC CCACGAGGTG
CAGGTGCAGT CCGATGGCGG CGATTGGTAT CTGCTGCGCA TCCAGCCCTA CCGCAGTACG
CGGAACGTGA TCCGCGGGGT GGTCTGCACC TTCCAGTCTG CTTGCACCTG A
 
Protein sequence
MPPPTDRRPL DPLPIPIVAI GGSAGSLKPL QAFLAHLPTD SGAAYVIITH HPSGQRSLLP 
EILERQTELP VQMVEEGETL GPDRIYIALP EDGWALRQGQ LIRSRATETR PGGGAPYPID
AFFRSLAEEA GQGGLAVVLS GTGSDGTLGV KAIKSQSGMV MAQDPKTAEF GDMPANAIAT
GQVDYVLAPA DMPATLVGYL GARSERQGAP SSRRRTIPEE VLGPILRQVR HCTGHDFSGY
KTSTLERRLE RRMDLLQISD PRAYSIHLQS HPEELNRLFQ DFLISVTNFF RDPRAWATLS
EELLPGMLRR AAHRGGEFRA WVVGCATGEE AYTLAILIRE CLADWEQAPE VRIFATDVDQ
AAIETARVGR YPAGIADDLT HQRLRRYFAA ENDTYRIVRE VRDMVIFADH NALQDPPFTH
MDLITCRNLL IYLERDHQMR LLALFRYALR DRGLLFLGPS ESPDQASEAF EVEAKEDRIY
RVAEDAARTN LLDMPGPRRF ARSLPVQSTA APAANSDGEG FSHHVERLLA LRFAPPSVVV
NDRGEVAYIH GRTGRFLEPA HGPVQNQLVE MARPGLRAPL SQALEEVARG RAEEVGQRVQ
IQTDDDADPE WLRFEVRRIH TPAALKGFRL VTLYSEAGTE VASLGVELEP RSESEAESEG
PGTEAERRLR RELENARQDK QVAVNEMQST NEELQSMNEE LQSMNEELQS SNEELEVAKE
EVESLNQELR SVNAELQVRV DDLTETNDDL KNLLDSTHIA TLFLDEALNI KRFTTPVQEL
IAVRPADIGR PVADLKTSLR YDGLVADAES VLDTLIPHEV QVQSDGGDWY LLRIQPYRST
RNVIRGVVCT FQSACT