Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3739 |
Symbol | |
ID | 6411417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4002282 |
End bp | 4005419 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642713621 |
Product | MCP methyltransferase, CheR-type |
Protein accession | YP_001992714 |
Protein GI | 192292109 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTG GGAAGTCAGG CCAAGAGACC GGTGCGTCTA TGGTTTCGCC CCGTCGGCGC CCGCCTTCCC TGGTGGTCGG CATTGGTGCA TCGGCGGGCG GGCTCGCCGC CTTCAAGACG TTCTTTGACA ATATGCCGGC CGACACCGGT ATGGCGTTCG TGCTGGTTCA GCACCTCGAT CCCGATCACA AGAGTCTGCT GGTCGAGCTG CGACCGCATT CGGCCATGCC GGTGGTCGAG GCGCAGGACC ACGATCCTCT GGCGCCCAAC CAAGTTTATG TGATCCCGCC CAATGCAACG CTGTCTCTCG AGGGAGACGT TCTACGCGTT GCGACGCCCT CGCCCGCGCG GGAGTATCGT CGTCCGATCG ACACGTTCTT CGCGTCGCTC GCGGAGAGCC AGGAGGATTG CGCAGTCGGC ATCATCCTGT CCGGTGTCGG CAGCGACGGG TCGCTCGGCA TCAAGGCCAT CAAGGAACAT GGCGGGTTTA CGCTGGCGCA GGCGGAGTTC GACGATACCG CAATGACGGG AATGCCGAGC AGTGCCGCGG CCACGGGACT GGTCGATCGC GTCGCCTCGG TCGAGAGCCT GCCGACCAAA TTGCTCGAGC ATCAAGCCTA TCTGACCAAG GTCGAGGAGC AGAAAGGGGC AGATGGCGCA CGCGAGGACG TCCGCGGCAG CTTGAGCGCC ATTACGGCGG TGCTGCGCAG ACGGCTCAAG CACGATTTCA GCGGCTACAA GCAAAACACC CTCATCCGCC GAATTCAGCG CCGGATGCAG GTTCTTCAGA TCGAGTCGGT CACCGCTTAT GCAGAGCATC TGCGCAAGGA GCCTTCCGAA GGCGACGCGC TGTTTCGCGA GCTGCTGATC GGCGTCACCC AGTTCTTCCG CGACGAAGAC GCATTCGACT CCCTGAAGGC CAATTTCCTG CCGTCGCTGT TCACCGGGCG AGATGCGGAC GATCCGATCC GGGTCTGGGT GGCAGGCTGC GCCACCGGCG AGGAAGCGTA TTCGATTGCG ATCATGCTGC AGGAACTCCT CGGCTCCCAT CAACACGAGG CTGCTGTCAC CATTTTCGCC ACCGATATCG ATCCGCAGGC CGTCGCGTTC GCCCGCGCCG CGCGGTTCCG CCGAATTGAC GGCCTATCGC AGGAGCGGCT TCAACGCTGG TTCGTGAAAG ACGGCGACGA CTACGTTCCG ACTCATGTCA TCCGGGAGAT GTGCGTTTTC TCCGAGCACA ATCTGGTCAG AGATCCTCCG TTCTCCAGGA TCGACCTGAT TACATGCCGC AACGTCCTGA TCTATATGGA GAACGATTTT CAGCACCGGG TGATGCAGAC GTTCCATTAT GCACTGCGGC CCGGCGGCTA TCTGTTCATC GGTCCATCCG AAAGCATCAG CCGCGAAACA GGATTGTTCA GCATCGTCGA CAAAAAGCAC CGCATCCTGC AACGCCGAGA CGGCGCCAGA GCCTCGCTGC CGCACTTCGT GCCGCAGGCA GGGGCCATTT CATCTCCCCA ACTGCCGGCC AACCGGATCG AAGACCAAAT CGACAAGAGC GCGCGCCGCG TCATGGCGAA GCACTCTCCG GCTTATTTCA TTATCGATCG CAACCACAAC ATCGTCCGGT TTTCCGGCGG CGAGACCGGG CGCTATCTCG AGCCTTCGGA AGGCAACGCC AGCCTCGACC TGTTCGCCAA TCTGGCCAGA AGCCTCAGAA CGCAGGTCCG TCGCGCTGTC GAGACCGCCT TCTCGTCGGG GCGCGCGGTT GAAGAAGAAA ACCTGAGACT CGAAGGCAAG CCGCCGGTCG ACCTCGTCGT CGAACCGATT ATCGAGGTCG GACATCCGCC GAGCTTGGTA GTGGTCGCCT TCCGAACCAG CCCTCATACA ACCGACCTGC CGCAAGAGAC CGAGATATCG CCGGCGAACC GGCGCGAGCT CGAGGCGATT CAGCAGGAAT TTCGCGCCTT ACAGATCCAA CATCGGGCGA CCAGCGAGGA ACTGGAAAGC CAGATCGAAA ATATGAAATC GGTGACCGAG GAGTTCCAGT CGGTCAACGA GGAGCTTCAA TCGTCCAATG AGGAGCTCGA GACCGCCAAG GAGGAGATGC AGTCGGTCAA CGAGGAACTG CAAACCATCA ACAGCGAACT GCACGGCAAG AACGAGCTGC TGCTGCAGGC CAACAACGAT CTTCAGAACC TGCTCGACAA CACGCAGATC GCCACCATCT TTCTCGACGA CGATCTCACG GTCCGAAACT TCACGCCGGC GGCGCGCGAA GTGTTTTCGC TGCGCGATGG CGACCGCGGC CGGCCGGTGA CGGAGATCAC CTCCCTGCTG TCCTACGACA AGCTGTGCGA AGACGTCAGG ACCGTGCAAC GCACCCTCGG TGTCGTGGAA AGCCAGCTCG ATCTCAAGGA CGAGAGCGCG ACCTATATTA TGCGGATCAG GCCCTACCGC ACGGTCGCCA ACGTCATCTC GGGAGTCGTG ATCACGTTCA GCAACATCAC AGAGCAGAAG CAGCAGCACG ACCACCTTCA AGTCTTGATG GGGGAGCTCC AGCATCGCAC CAACAACGTC TTTGCGGTCA TTCTTGCGAT CGCACGACAG ACAGTGCGCA ACAGCGCATC GTTGGAAACA TTCGAACAGC AATTCGGCGC GCGACTGCTG GCGCTGGCGC AAGCCAACGC GCTGCTCGTC GACCAGGAGT GGAAGGGCGT TTCACTGGAG AAACTGATCG AAGCGCAGCT GGCGCCGTTT ATCGGTGGCG ACTCCACTCG GCTCGAGTTG GTCGGCCCCA CCGTGACGAT GGCCGGCGCC ACCATCCAGA CGATCGGGCT CGCGCTGCAC GAGCTTGCGA CCAATGCATC CAAATACGGC TCACTATCGG TGCCGGGCGG CAAGGTGGTC GTAAGCTGGA GCTTCGACGA GGGCGGAACG TCCCCCGAGT CCTTCCGACT GGAGTGGCGA GAACAGGATG GTCCGCCGGT CAAGCCGAGC GACCGCAAAG GCTTCGGTCA CTTCGTCACA AAGCAGATGG TCACGCGCTC ACTCAACGCG AAGGTGGACG TCGACCTCGC TCCCGAAGGA CTGCGATGGA GCATGCAGAT GCCGGCGAAT GAAGCGCGCA GCGGATAG
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Protein sequence | MSVGKSGQET GASMVSPRRR PPSLVVGIGA SAGGLAAFKT FFDNMPADTG MAFVLVQHLD PDHKSLLVEL RPHSAMPVVE AQDHDPLAPN QVYVIPPNAT LSLEGDVLRV ATPSPAREYR RPIDTFFASL AESQEDCAVG IILSGVGSDG SLGIKAIKEH GGFTLAQAEF DDTAMTGMPS SAAATGLVDR VASVESLPTK LLEHQAYLTK VEEQKGADGA REDVRGSLSA ITAVLRRRLK HDFSGYKQNT LIRRIQRRMQ VLQIESVTAY AEHLRKEPSE GDALFRELLI GVTQFFRDED AFDSLKANFL PSLFTGRDAD DPIRVWVAGC ATGEEAYSIA IMLQELLGSH QHEAAVTIFA TDIDPQAVAF ARAARFRRID GLSQERLQRW FVKDGDDYVP THVIREMCVF SEHNLVRDPP FSRIDLITCR NVLIYMENDF QHRVMQTFHY ALRPGGYLFI GPSESISRET GLFSIVDKKH RILQRRDGAR ASLPHFVPQA GAISSPQLPA NRIEDQIDKS ARRVMAKHSP AYFIIDRNHN IVRFSGGETG RYLEPSEGNA SLDLFANLAR SLRTQVRRAV ETAFSSGRAV EEENLRLEGK PPVDLVVEPI IEVGHPPSLV VVAFRTSPHT TDLPQETEIS PANRRELEAI QQEFRALQIQ HRATSEELES QIENMKSVTE EFQSVNEELQ SSNEELETAK EEMQSVNEEL QTINSELHGK NELLLQANND LQNLLDNTQI ATIFLDDDLT VRNFTPAARE VFSLRDGDRG RPVTEITSLL SYDKLCEDVR TVQRTLGVVE SQLDLKDESA TYIMRIRPYR TVANVISGVV ITFSNITEQK QQHDHLQVLM GELQHRTNNV FAVILAIARQ TVRNSASLET FEQQFGARLL ALAQANALLV DQEWKGVSLE KLIEAQLAPF IGGDSTRLEL VGPTVTMAGA TIQTIGLALH ELATNASKYG SLSVPGGKVV VSWSFDEGGT SPESFRLEWR EQDGPPVKPS DRKGFGHFVT KQMVTRSLNA KVDVDLAPEG LRWSMQMPAN EARSG
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