More than 300 homologs were found in PanDaTox collection
for query gene Rpal_3739 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  47.69 
 
 
1190 aa  759    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  100 
 
 
1045 aa  2143    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.2 
 
 
1063 aa  688    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  64.54 
 
 
1092 aa  1400    Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.65 
 
 
1061 aa  689    Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  42.55 
 
 
1027 aa  770    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  41.16 
 
 
980 aa  624  1e-177  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.75 
 
 
1008 aa  608  9.999999999999999e-173  Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  41.07 
 
 
879 aa  599  1e-169  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.57 
 
 
1168 aa  597  1e-169  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.74 
 
 
993 aa  590  1e-167  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.21 
 
 
887 aa  586  1e-166  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  38.34 
 
 
1008 aa  586  1e-166  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  40.99 
 
 
877 aa  588  1e-166  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  39.89 
 
 
998 aa  581  1e-164  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.24 
 
 
1324 aa  576  1.0000000000000001e-163  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.91 
 
 
1000 aa  577  1.0000000000000001e-163  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.43 
 
 
971 aa  571  1e-161  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  38.98 
 
 
1361 aa  572  1e-161  Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  39.93 
 
 
840 aa  569  1e-161  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.19 
 
 
1138 aa  566  1e-160  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  37.91 
 
 
1218 aa  568  1e-160  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  40.87 
 
 
868 aa  564  1.0000000000000001e-159  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.14 
 
 
852 aa  564  1.0000000000000001e-159  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  39.43 
 
 
840 aa  565  1.0000000000000001e-159  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  38.44 
 
 
1408 aa  565  1.0000000000000001e-159  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  40.12 
 
 
1233 aa  561  1e-158  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4915  PAS  39.25 
 
 
1384 aa  559  1e-157  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  39.76 
 
 
1035 aa  558  1e-157  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.91 
 
 
1163 aa  553  1e-156  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  39.03 
 
 
1242 aa  549  1e-155  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  39.42 
 
 
1006 aa  552  1e-155  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  38.91 
 
 
1279 aa  548  1e-154  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  39.52 
 
 
1160 aa  547  1e-154  Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.44 
 
 
1399 aa  539  1e-151  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.29 
 
 
1167 aa  539  1e-151  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  37.81 
 
 
1274 aa  536  1e-151  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  38.4 
 
 
1407 aa  538  1e-151  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.29 
 
 
1404 aa  535  1e-150  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  37.37 
 
 
1535 aa  534  1e-150  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  36.76 
 
 
1222 aa  514  1e-144  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  38.04 
 
 
1380 aa  511  1e-143  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  37.2 
 
 
1371 aa  505  1e-141  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  37.03 
 
 
1445 aa  504  1e-141  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.83 
 
 
1120 aa  500  1e-140  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.13 
 
 
1483 aa  501  1e-140  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  36.33 
 
 
1215 aa  503  1e-140  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  37.25 
 
 
1149 aa  499  1e-140  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  35.6 
 
 
1348 aa  494  9.999999999999999e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  37.31 
 
 
856 aa  496  9.999999999999999e-139  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  37.93 
 
 
853 aa  491  1e-137  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  37.4 
 
 
1759 aa  476  1e-133  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.53 
 
 
1158 aa  478  1e-133  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  36.09 
 
 
1306 aa  477  1e-133  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  34.49 
 
 
820 aa  473  1.0000000000000001e-131  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  34.97 
 
 
1010 aa  469  9.999999999999999e-131  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  36.16 
 
 
1698 aa  463  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  36.67 
 
 
2468 aa  461  9.999999999999999e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  36.08 
 
 
1165 aa  458  1e-127  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  36.21 
 
 
1344 aa  451  1e-125  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  33.22 
 
 
1499 aa  451  1e-125  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  34.33 
 
 
1453 aa  447  1.0000000000000001e-124  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  35.27 
 
 
1170 aa  448  1.0000000000000001e-124  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  35.27 
 
 
1170 aa  448  1.0000000000000001e-124  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  33.41 
 
 
1337 aa  440  9.999999999999999e-123  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  30.88 
 
 
1618 aa  438  1e-121  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  32.74 
 
 
1200 aa  435  1e-120  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  35.16 
 
 
1303 aa  435  1e-120  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  40.43 
 
 
629 aa  430  1e-119  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  35.99 
 
 
1418 aa  429  1e-118  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  35.55 
 
 
1535 aa  412  1e-113  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  33.25 
 
 
1214 aa  392  1e-107  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.79 
 
 
1089 aa  386  1e-105  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  31.45 
 
 
1220 aa  385  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  32.81 
 
 
1248 aa  381  1e-104  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  38.49 
 
 
639 aa  370  1e-100  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  31.54 
 
 
1378 aa  366  1e-99  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  32.54 
 
 
824 aa  353  7e-96  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  37.82 
 
 
617 aa  347  5e-94  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.65 
 
 
1110 aa  339  1.9999999999999998e-91  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  33.03 
 
 
837 aa  337  5.999999999999999e-91  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_010717  PXO_03023  methyltransferase  36.04 
 
 
604 aa  334  4e-90  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  34.49 
 
 
1193 aa  323  8e-87  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  30.53 
 
 
813 aa  322  3e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  33.12 
 
 
1084 aa  312  2e-83  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  29.36 
 
 
823 aa  311  5e-83  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  35.38 
 
 
1303 aa  291  5.0000000000000004e-77  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  39.86 
 
 
432 aa  285  5.000000000000001e-75  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.54 
 
 
2031 aa  252  3e-65  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  32.16 
 
 
631 aa  246  1.9999999999999999e-63  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.84 
 
 
617 aa  241  8e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.31 
 
 
618 aa  226  2e-57  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  45.04 
 
 
336 aa  225  3e-57  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_007643  Rru_A0741  Signal transduction histidine kinase  43.16 
 
 
498 aa  189  3e-46  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0827  signal transduction histidine kinase  38.94 
 
 
512 aa  166  2.0000000000000002e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1581  protein-glutamate O-methyltransferase  36.47 
 
 
269 aa  165  5.0000000000000005e-39  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.175681  normal  0.125652 
 
 
-
 
NC_010172  Mext_1888  PAS sensor protein  34.43 
 
 
326 aa  157  8e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2544  Signal transduction histidine kinase  36.84 
 
 
489 aa  157  1e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5905  signal transduction histidine kinase  37.21 
 
 
601 aa  156  2e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584764  n/a   
 
 
-
 
NC_010511  M446_5922  signal transduction histidine kinase  35.89 
 
 
346 aa  155  2.9999999999999998e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.151215  normal 
 
 
-
 
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