Gene Mnod_5905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5905 
Symbol 
ID7301173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6022602 
End bp6024407 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content74% 
IMG OID643603529 
Productsignal transduction histidine kinase 
Protein accessionYP_002501036 
Protein GI220925734 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.584764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCGCG TCTTGGACCA CAGGCCTGAC CAGCAGCCCG CCCGGCAGGG AGACGCGCCG 
GAGCCGGGCT ACCCCGATGA CGCCATCGCA CGCCTCGCCT TCGAGGCGGC GCCGGTCGGG
CTCGCTTGCC TGGCCGGGCC GGACGACCGG CTCGTCGCCG TCAATCCGCG GCTCTGCGCG
CTCCTCGCGG CCGCGCCGGC CGAGCTCCTG GGCCGGCGGC TCGCCGACCT CATGGATCCC
GAAACCGCGG CGGTCGAGCC CGGATCCGGG GAGCCCGTCG AGCAGTGCTG GCGGCGCCCC
GATCGCGGCG CCGCCTGGGT CATGGTCCGA GCCGGGCCGC GGCGCGACGG GCAGCGGGTT
CTGGTGGTCG AGGCAGCGGA GGACCACGGT GCCGCTGCCC GTGCCGAGCA GACCCGCCTC
GCGCTCGCCT CCGCCGGGCT CGGCGACTGG AGCTGGAGCC CGGCGAGCGG AGAGATCACC
CTGTCGGAGC GCGCCGCCGA GATCCTGGGC CTGCCGCCGG GCCCCTCGGT CACCTGGGAG
GATCTGCAGC TCCGCTTCCA CCGCGACGAC CTGGAGCGGG CCCGCGCCCT TATTCAGGAG
GCCCTGCCGG AGGGGCGGGC CTACGCCGTC GACGCGCGCT ACCGCCGCCC GCCCGACGAT
CAGGAAGTGT GGATCTCGGC CCGCGGCCGG GCCCAGTTCG GGCCGGACGG GGCGGTCGCC
GGCATGATCG GCGTCGTCCA GGACGTCACC GCCCGCGAGG AGGCGCGGCG CGCCCTCCAT
GACCGCGAGC AGCGGCTGCG CGTCGCCACC TCGGTGGCGG CGCTCGGCAT CTTCGAGTGG
CATCTCCTCG ACGATCAGGC GCTCTGGGAG AACGAGCGCA TGTGGGAGAT CTTCGGCCGC
CGCCCGCAGG ACGGCACGAT CAGCATGACC GAGTTCTTCC GCGACGTGAT GCATCCGGAG
GACAAGGGCC CGTTCCGTGC CGCCATCGCG GCCGCCCTGC AGGGCGAGGG CGTCCTCCAC
GCCGCAGGGC GCATCCGCCG CGCGAGCGAC GGGGCGTGGC GGACGATCGA GATGGCCGGG
CGCTTCGAGC GCGACACGCC GGGGGGCCTT CCGCGCCGCC TCATCGGCGT CGTGGCCGAC
ATCACCGACC GGCGCCTCGC CGAGGAGCGC CAGACGCTGC TGATCCGCGA GCTGCACCAT
CGGGTGAAGA ACACGCTCGC CACCGTGCAG GCCATCGTCG GCTCCACCGC CCGCACCGCA
TCGAGCATCG AGAGCTTCTA CGAGGCCTTC GTCGGCCGGA TCATGTCGCT CGCCCACACC
CATTCGGTGC TGACCGAGGA CGTGTGGCAG ACGGCCTCCC TGCGCGGCCT CCTGGAGAAC
GAGCTCACGC CCTATGCGGA CGGCCCGATG ACCCCGGAGG CCGACGGGCG CATCACCCTC
GAAGGGCCGG CCGTCGACCT CGCCTCCGAG ATCGCGGTGC CGATCGGCAT GGCGATCCAC
GAACTCACCA CCAACGCGGC GAAATACGGC GCCCTGTCGG GCCGCGGCGG GCGCGTGCGG
GTGCGCTGGA ATCTGGAGCC CGAGGGCGAC CGGGTCGTGC TGCGCTTCGA ATGGCGCGAA
TCCGGCGGGC CGCCGGTGAT GCCGCCCAGT CGCCAGGGCT TCGGCTCGCG GCTGCTGCAG
CGGGTGCTCT CGACCCAGGT CCAGGCCAAT GTCGCGATCG ATTACGCCCC CGACGGTCTG
CGCCTGACGA TGCTGGCCCC GATGCCGAAG CGCAACATCG CCCTCAACCC GCTGGCGAAG
CTCTAA
 
Protein sequence
MGRVLDHRPD QQPARQGDAP EPGYPDDAIA RLAFEAAPVG LACLAGPDDR LVAVNPRLCA 
LLAAAPAELL GRRLADLMDP ETAAVEPGSG EPVEQCWRRP DRGAAWVMVR AGPRRDGQRV
LVVEAAEDHG AAARAEQTRL ALASAGLGDW SWSPASGEIT LSERAAEILG LPPGPSVTWE
DLQLRFHRDD LERARALIQE ALPEGRAYAV DARYRRPPDD QEVWISARGR AQFGPDGAVA
GMIGVVQDVT AREEARRALH DREQRLRVAT SVAALGIFEW HLLDDQALWE NERMWEIFGR
RPQDGTISMT EFFRDVMHPE DKGPFRAAIA AALQGEGVLH AAGRIRRASD GAWRTIEMAG
RFERDTPGGL PRRLIGVVAD ITDRRLAEER QTLLIRELHH RVKNTLATVQ AIVGSTARTA
SSIESFYEAF VGRIMSLAHT HSVLTEDVWQ TASLRGLLEN ELTPYADGPM TPEADGRITL
EGPAVDLASE IAVPIGMAIH ELTTNAAKYG ALSGRGGRVR VRWNLEPEGD RVVLRFEWRE
SGGPPVMPPS RQGFGSRLLQ RVLSTQVQAN VAIDYAPDGL RLTMLAPMPK RNIALNPLAK
L