| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3739 |
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| Symbol | |
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| ID | 6411417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4002282 |
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| End bp | 4005419 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642713621 |
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| Product | MCP methyltransferase, CheR-type |
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| Protein accession | YP_001992714 |
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| Protein GI | 192292109 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTG GGAAGTCAGG CCAAGAGACC GGTGCGTCTA TGGTTTCGCC CCGTCGGCGC
CCGCCTTCCC TGGTGGTCGG CATTGGTGCA TCGGCGGGCG GGCTCGCCGC CTTCAAGACG
TTCTTTGACA ATATGCCGGC CGACACCGGT ATGGCGTTCG TGCTGGTTCA GCACCTCGAT
CCCGATCACA AGAGTCTGCT GGTCGAGCTG CGACCGCATT CGGCCATGCC GGTGGTCGAG
GCGCAGGACC ACGATCCTCT GGCGCCCAAC CAAGTTTATG TGATCCCGCC CAATGCAACG
CTGTCTCTCG AGGGAGACGT TCTACGCGTT GCGACGCCCT CGCCCGCGCG GGAGTATCGT
CGTCCGATCG ACACGTTCTT CGCGTCGCTC GCGGAGAGCC AGGAGGATTG CGCAGTCGGC
ATCATCCTGT CCGGTGTCGG CAGCGACGGG TCGCTCGGCA TCAAGGCCAT CAAGGAACAT
GGCGGGTTTA CGCTGGCGCA GGCGGAGTTC GACGATACCG CAATGACGGG AATGCCGAGC
AGTGCCGCGG CCACGGGACT GGTCGATCGC GTCGCCTCGG TCGAGAGCCT GCCGACCAAA
TTGCTCGAGC ATCAAGCCTA TCTGACCAAG GTCGAGGAGC AGAAAGGGGC AGATGGCGCA
CGCGAGGACG TCCGCGGCAG CTTGAGCGCC ATTACGGCGG TGCTGCGCAG ACGGCTCAAG
CACGATTTCA GCGGCTACAA GCAAAACACC CTCATCCGCC GAATTCAGCG CCGGATGCAG
GTTCTTCAGA TCGAGTCGGT CACCGCTTAT GCAGAGCATC TGCGCAAGGA GCCTTCCGAA
GGCGACGCGC TGTTTCGCGA GCTGCTGATC GGCGTCACCC AGTTCTTCCG CGACGAAGAC
GCATTCGACT CCCTGAAGGC CAATTTCCTG CCGTCGCTGT TCACCGGGCG AGATGCGGAC
GATCCGATCC GGGTCTGGGT GGCAGGCTGC GCCACCGGCG AGGAAGCGTA TTCGATTGCG
ATCATGCTGC AGGAACTCCT CGGCTCCCAT CAACACGAGG CTGCTGTCAC CATTTTCGCC
ACCGATATCG ATCCGCAGGC CGTCGCGTTC GCCCGCGCCG CGCGGTTCCG CCGAATTGAC
GGCCTATCGC AGGAGCGGCT TCAACGCTGG TTCGTGAAAG ACGGCGACGA CTACGTTCCG
ACTCATGTCA TCCGGGAGAT GTGCGTTTTC TCCGAGCACA ATCTGGTCAG AGATCCTCCG
TTCTCCAGGA TCGACCTGAT TACATGCCGC AACGTCCTGA TCTATATGGA GAACGATTTT
CAGCACCGGG TGATGCAGAC GTTCCATTAT GCACTGCGGC CCGGCGGCTA TCTGTTCATC
GGTCCATCCG AAAGCATCAG CCGCGAAACA GGATTGTTCA GCATCGTCGA CAAAAAGCAC
CGCATCCTGC AACGCCGAGA CGGCGCCAGA GCCTCGCTGC CGCACTTCGT GCCGCAGGCA
GGGGCCATTT CATCTCCCCA ACTGCCGGCC AACCGGATCG AAGACCAAAT CGACAAGAGC
GCGCGCCGCG TCATGGCGAA GCACTCTCCG GCTTATTTCA TTATCGATCG CAACCACAAC
ATCGTCCGGT TTTCCGGCGG CGAGACCGGG CGCTATCTCG AGCCTTCGGA AGGCAACGCC
AGCCTCGACC TGTTCGCCAA TCTGGCCAGA AGCCTCAGAA CGCAGGTCCG TCGCGCTGTC
GAGACCGCCT TCTCGTCGGG GCGCGCGGTT GAAGAAGAAA ACCTGAGACT CGAAGGCAAG
CCGCCGGTCG ACCTCGTCGT CGAACCGATT ATCGAGGTCG GACATCCGCC GAGCTTGGTA
GTGGTCGCCT TCCGAACCAG CCCTCATACA ACCGACCTGC CGCAAGAGAC CGAGATATCG
CCGGCGAACC GGCGCGAGCT CGAGGCGATT CAGCAGGAAT TTCGCGCCTT ACAGATCCAA
CATCGGGCGA CCAGCGAGGA ACTGGAAAGC CAGATCGAAA ATATGAAATC GGTGACCGAG
GAGTTCCAGT CGGTCAACGA GGAGCTTCAA TCGTCCAATG AGGAGCTCGA GACCGCCAAG
GAGGAGATGC AGTCGGTCAA CGAGGAACTG CAAACCATCA ACAGCGAACT GCACGGCAAG
AACGAGCTGC TGCTGCAGGC CAACAACGAT CTTCAGAACC TGCTCGACAA CACGCAGATC
GCCACCATCT TTCTCGACGA CGATCTCACG GTCCGAAACT TCACGCCGGC GGCGCGCGAA
GTGTTTTCGC TGCGCGATGG CGACCGCGGC CGGCCGGTGA CGGAGATCAC CTCCCTGCTG
TCCTACGACA AGCTGTGCGA AGACGTCAGG ACCGTGCAAC GCACCCTCGG TGTCGTGGAA
AGCCAGCTCG ATCTCAAGGA CGAGAGCGCG ACCTATATTA TGCGGATCAG GCCCTACCGC
ACGGTCGCCA ACGTCATCTC GGGAGTCGTG ATCACGTTCA GCAACATCAC AGAGCAGAAG
CAGCAGCACG ACCACCTTCA AGTCTTGATG GGGGAGCTCC AGCATCGCAC CAACAACGTC
TTTGCGGTCA TTCTTGCGAT CGCACGACAG ACAGTGCGCA ACAGCGCATC GTTGGAAACA
TTCGAACAGC AATTCGGCGC GCGACTGCTG GCGCTGGCGC AAGCCAACGC GCTGCTCGTC
GACCAGGAGT GGAAGGGCGT TTCACTGGAG AAACTGATCG AAGCGCAGCT GGCGCCGTTT
ATCGGTGGCG ACTCCACTCG GCTCGAGTTG GTCGGCCCCA CCGTGACGAT GGCCGGCGCC
ACCATCCAGA CGATCGGGCT CGCGCTGCAC GAGCTTGCGA CCAATGCATC CAAATACGGC
TCACTATCGG TGCCGGGCGG CAAGGTGGTC GTAAGCTGGA GCTTCGACGA GGGCGGAACG
TCCCCCGAGT CCTTCCGACT GGAGTGGCGA GAACAGGATG GTCCGCCGGT CAAGCCGAGC
GACCGCAAAG GCTTCGGTCA CTTCGTCACA AAGCAGATGG TCACGCGCTC ACTCAACGCG
AAGGTGGACG TCGACCTCGC TCCCGAAGGA CTGCGATGGA GCATGCAGAT GCCGGCGAAT
GAAGCGCGCA GCGGATAG
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| Protein sequence | MSVGKSGQET GASMVSPRRR PPSLVVGIGA SAGGLAAFKT FFDNMPADTG MAFVLVQHLD
PDHKSLLVEL RPHSAMPVVE AQDHDPLAPN QVYVIPPNAT LSLEGDVLRV ATPSPAREYR
RPIDTFFASL AESQEDCAVG IILSGVGSDG SLGIKAIKEH GGFTLAQAEF DDTAMTGMPS
SAAATGLVDR VASVESLPTK LLEHQAYLTK VEEQKGADGA REDVRGSLSA ITAVLRRRLK
HDFSGYKQNT LIRRIQRRMQ VLQIESVTAY AEHLRKEPSE GDALFRELLI GVTQFFRDED
AFDSLKANFL PSLFTGRDAD DPIRVWVAGC ATGEEAYSIA IMLQELLGSH QHEAAVTIFA
TDIDPQAVAF ARAARFRRID GLSQERLQRW FVKDGDDYVP THVIREMCVF SEHNLVRDPP
FSRIDLITCR NVLIYMENDF QHRVMQTFHY ALRPGGYLFI GPSESISRET GLFSIVDKKH
RILQRRDGAR ASLPHFVPQA GAISSPQLPA NRIEDQIDKS ARRVMAKHSP AYFIIDRNHN
IVRFSGGETG RYLEPSEGNA SLDLFANLAR SLRTQVRRAV ETAFSSGRAV EEENLRLEGK
PPVDLVVEPI IEVGHPPSLV VVAFRTSPHT TDLPQETEIS PANRRELEAI QQEFRALQIQ
HRATSEELES QIENMKSVTE EFQSVNEELQ SSNEELETAK EEMQSVNEEL QTINSELHGK
NELLLQANND LQNLLDNTQI ATIFLDDDLT VRNFTPAARE VFSLRDGDRG RPVTEITSLL
SYDKLCEDVR TVQRTLGVVE SQLDLKDESA TYIMRIRPYR TVANVISGVV ITFSNITEQK
QQHDHLQVLM GELQHRTNNV FAVILAIARQ TVRNSASLET FEQQFGARLL ALAQANALLV
DQEWKGVSLE KLIEAQLAPF IGGDSTRLEL VGPTVTMAGA TIQTIGLALH ELATNASKYG
SLSVPGGKVV VSWSFDEGGT SPESFRLEWR EQDGPPVKPS DRKGFGHFVT KQMVTRSLNA
KVDVDLAPEG LRWSMQMPAN EARSG
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