More than 300 homologs were found in PanDaTox collection
for query gene Bind_0707 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009621  Smed_5776  putative PAS/PAC sensor protein  39 
 
 
1160 aa  747    Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  39.49 
 
 
980 aa  716    Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  43.43 
 
 
1027 aa  641    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.93 
 
 
1138 aa  637    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.54 
 
 
887 aa  647    Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  40.94 
 
 
1008 aa  644    Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.52 
 
 
1008 aa  645    Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.31 
 
 
1163 aa  712    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  47.91 
 
 
1092 aa  773    Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  37.78 
 
 
1167 aa  719    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  100 
 
 
1190 aa  2445    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  47.46 
 
 
1045 aa  761    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  38.83 
 
 
1006 aa  640    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  37.92 
 
 
1408 aa  638    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.43 
 
 
1168 aa  699    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  37.55 
 
 
1361 aa  630  1e-179  Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  41.92 
 
 
879 aa  630  1e-179  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  39.32 
 
 
1000 aa  630  1e-179  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  41.89 
 
 
1233 aa  626  1e-178  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  40.78 
 
 
868 aa  622  1e-177  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  43.36 
 
 
1061 aa  625  1e-177  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  42.59 
 
 
1242 aa  620  1e-176  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  42.84 
 
 
1279 aa  622  1e-176  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  40.13 
 
 
998 aa  622  1e-176  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.02 
 
 
1324 aa  619  1e-176  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.5 
 
 
993 aa  617  1e-175  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  40.56 
 
 
971 aa  617  1e-175  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007348  Reut_B4915  PAS  37.56 
 
 
1384 aa  610  1e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  40.69 
 
 
840 aa  607  9.999999999999999e-173  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  38.14 
 
 
1535 aa  609  9.999999999999999e-173  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  40.31 
 
 
840 aa  604  1.0000000000000001e-171  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  36.69 
 
 
1348 aa  603  1.0000000000000001e-171  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.54 
 
 
1158 aa  599  1e-170  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  34.88 
 
 
1149 aa  600  1e-170  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_011894  Mnod_3755  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  43.11 
 
 
1063 aa  601  1e-170  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  34.24 
 
 
1170 aa  596  1e-169  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  42.09 
 
 
852 aa  599  1e-169  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  34.24 
 
 
1170 aa  595  1e-168  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  37.73 
 
 
1035 aa  592  1e-167  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  41.63 
 
 
877 aa  592  1e-167  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  36.2 
 
 
1407 aa  586  1e-166  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  38.89 
 
 
1399 aa  580  1e-164  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.34 
 
 
1404 aa  582  1e-164  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  33.62 
 
 
1165 aa  582  1e-164  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  36.77 
 
 
1371 aa  575  1.0000000000000001e-162  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  38.3 
 
 
1218 aa  574  1.0000000000000001e-162  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  36.7 
 
 
1344 aa  571  1e-161  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  36.42 
 
 
1380 aa  565  1.0000000000000001e-159  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  35.73 
 
 
1222 aa  553  1e-156  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  36.75 
 
 
1445 aa  545  1e-153  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  37.51 
 
 
1483 aa  536  1e-151  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  35.95 
 
 
1303 aa  537  1e-151  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.95 
 
 
1120 aa  535  1e-150  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  33.27 
 
 
1274 aa  532  1e-149  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  33.46 
 
 
1215 aa  530  1e-149  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  37.78 
 
 
856 aa  520  1e-146  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  33.17 
 
 
1499 aa  515  1e-144  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  38.99 
 
 
853 aa  512  1e-143  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  36.5 
 
 
1306 aa  501  1e-140  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  36.87 
 
 
1698 aa  498  1e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  37.96 
 
 
2468 aa  493  9.999999999999999e-139  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  34.24 
 
 
1337 aa  492  1e-137  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  35.55 
 
 
820 aa  488  1e-136  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  37.33 
 
 
1418 aa  486  1e-135  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  34.62 
 
 
1010 aa  473  1e-132  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  34.1 
 
 
1453 aa  466  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  36.33 
 
 
1759 aa  463  1e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  34.02 
 
 
1618 aa  463  9.999999999999999e-129  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  31.07 
 
 
1200 aa  457  1e-127  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  36.59 
 
 
1378 aa  454  1.0000000000000001e-126  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  33.68 
 
 
1214 aa  454  1.0000000000000001e-126  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  32.77 
 
 
1535 aa  451  1e-125  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  32.81 
 
 
1220 aa  449  1.0000000000000001e-124  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  40.22 
 
 
639 aa  408  1.0000000000000001e-112  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  31.74 
 
 
1248 aa  406  1e-111  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34 
 
 
1089 aa  402  9.999999999999999e-111  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  41.4 
 
 
629 aa  399  1e-109  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  32.75 
 
 
837 aa  385  1e-105  Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  33.55 
 
 
824 aa  369  1e-100  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  31.48 
 
 
823 aa  363  1e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  36.13 
 
 
617 aa  360  9e-98  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  35.67 
 
 
1110 aa  355  2.9999999999999997e-96  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  31.71 
 
 
813 aa  349  2e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  32.36 
 
 
1193 aa  343  2e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  34.86 
 
 
604 aa  339  1.9999999999999998e-91  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  33.07 
 
 
1084 aa  327  7e-88  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.28 
 
 
1303 aa  308  5.0000000000000004e-82  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  38.33 
 
 
432 aa  304  7.000000000000001e-81  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3427  MCP methyltransferase, CheR-type with PAS/PAC sensor  29 
 
 
2031 aa  291  5.0000000000000004e-77  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0889636 
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  32.78 
 
 
631 aa  249  2e-64  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_012858  Rleg_6933  signal transduction histidine kinase  41.08 
 
 
488 aa  249  2e-64  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0223762  normal 
 
 
-
 
NC_009719  Plav_0358  signal transduction histidine kinase  39.22 
 
 
602 aa  247  8e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007961  Nham_4618  signal transduction histidine kinase  36.11 
 
 
454 aa  245  3e-63  Nitrobacter hamburgensis X14  Bacteria  normal  0.723174  n/a   
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  34.2 
 
 
617 aa  238  7e-61  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.25 
 
 
618 aa  228  4e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_0678  two-component sensor histidine kinase  34.24 
 
 
460 aa  225  4e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.320332 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  43.93 
 
 
336 aa  221  7.999999999999999e-56  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_011984  Avi_9007  two component sensor kinase  38.02 
 
 
359 aa  212  4e-53  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2090  signal transduction histidine kinase  39.68 
 
 
372 aa  184  1e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.893944 
 
 
-
 
NC_011004  Rpal_3126  signal transduction histidine kinase  39.06 
 
 
352 aa  178  7e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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