Gene Avi_9007 details

Gene Information

• Locus tag: Avi_9007
• Symbol: exsG
• ID: 7367757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011984
• Strand: +
• Start bp: 6113
• End bp: 7192
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643644256
• Product: two component sensor kinase
• Protein accession: YP_002542553
• Protein GI: 222083150
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; [COG3920] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACA AAAACGAAAC CGGCGATGGC GATGGAGCCG ACGGTCACTT CCAGCGACCC 
GAAGCGGTCG TCGGAGCGGA TAAGCCGGCG CACGACCCAG CCGCGTTCCT GGCTGCTATC 
ATCGAATCGT CCGAGGACGC CATCGTCAGC AAATCCCTTC AGGGGATCAT CACCACCTGG 
AACAAGGGCG CCGAGCGGCT TTTCGGATAC AGCGCCGCAG AAGCTGTCGA TAAGCCGGTT 
ACGATTCTCA TTCCGGAGGA TCGGCTTGAC GAGGAGCCGG CGATCCTGGC GCGGATTCAT 
GCCGGGGAGC GCGTCGACCA TTTCGAAACA ATCAGGCGTC GCAAGGATGG CACCTTACTC 
GACATTTCGC TGACGATCTC GCCGATCCGC AACGGCGACG GCCAGATTAT CGGAGCCTCG 
AAGATCGCCC GTGACATTTC GGACCGAAAA CGCGCAGCCG AACGCCAGGA TCTTCTGCTT 
CGGGAGATGC ATCATCGGGT CAAGAACCTG TTTGCCATCA CCGGCAGCAT CATCACGTTG 
GCGGCCCGCA CCGCGCAGAC GCCGGGCGAA CTCGCGTCCT CAATGAAAGA CCGTCTCGTG 
GCGCTCTCGC AAGCGCACGA GATGACACTT CCGAGCTTCA CAGGCGACGA AGCATTTCAG 
GAGCGTTCCA CGACCCTCTT CGAACTTTTG TCCAGCCTGC TTTCACCATA CGGCGAGGGT 
GAGGAAGGGC GGTGGCGCCT TCATGGTGAA GACGCACCGA TCAGCGCTGA GCGCGTAACG 
AGCCTTGCAT TGCTGTTTCA TGAATATGCG ACCAATGCCG TGAAATACGG ATCACTCTCC 
AGTGTACAAG GTCGATTGGA CGTGACGCTC GGCGCACGCG AGGAGAGCTT CGAGATTTCA 
TGGTTGGAAT CGGGCGGACG ATCTTCCGGC AAACCAGAAC CAACAAATGC GGGGTTCGGC 
ACGAGGCTGG AACAGATGAT CATCTGCACC CTCAATGCAG AAGTTTCCAG AGATTGGCAG 
CCGCACGGCC TCCTGATCAA ACTTTCAATG CCCCGCGCCG CTTTCGCCGC GCCAGTTTAG 

 

Protein sequence

MTDKNETGDG DGADGHFQRP EAVVGADKPA HDPAAFLAAI IESSEDAIVS KSLQGIITTW 
NKGAERLFGY SAAEAVDKPV TILIPEDRLD EEPAILARIH AGERVDHFET IRRRKDGTLL 
DISLTISPIR NGDGQIIGAS KIARDISDRK RAAERQDLLL REMHHRVKNL FAITGSIITL 
AARTAQTPGE LASSMKDRLV ALSQAHEMTL PSFTGDEAFQ ERSTTLFELL SSLLSPYGEG 
EEGRWRLHGE DAPISAERVT SLALLFHEYA TNAVKYGSLS SVQGRLDVTL GAREESFEIS 
WLESGGRSSG KPEPTNAGFG TRLEQMIICT LNAEVSRDWQ PHGLLIKLSM PRAAFAAPV