| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1653 |
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| Symbol | |
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| ID | 6463154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1746059 |
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| End bp | 1749040 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727870 |
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| Product | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor |
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| Protein accession | YP_002018507 |
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| Protein GI | 194336713 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA CCCCCGCAAG CAGCCAGAAA ATTAAAGCAA GTGAAGAGCA TGCACTCAAG
AGTGAAGAAA AAATTCCTTT CCCGGTCGTC GGCATTGGCT CTTCGGCCGG TGGACTTGAA
GCGCTCGAAC TGTTTCTGAA GCATGTTCCT TATCCCTGCG GCATGGCCTT TGTTATCATA
CAGCACCTTG ACCCGACGCA CAAGGGAATT ATGGTTGAAC TGCTTCAGCG GGAAACGGCA
ATGCCTGTCT GCCAGGTCAG CGACAATCTT GAAATCGAGC CGGATCATGT CTATCTGATT
CCTCCGAACC AGGACATGTC GATACTGCAC GGGAAATTGT TTTTACTTGA CATGGTCAAA
CCACGTGGTC TTCGACTTCC TATTGATTTC TTTTTTCGTT CAATGGCCGA TGACCTTAAA
CAGCATTCCA TCGGCGTGAT TCTCTCTGGA ATGGGTTCCG ATGGCACACT TGGACTACGC
GCCATCAAGG AAAAAGGTGG TGGAGTATTT GTACAGGATC CAGCTTCCGC GAAGTTTGAC
GGAATGCCGC GAAGCGCTAT TGACGAAGGA CTGGCTGACG TTATCGTACC AGCAGAAAAT
CTTCCCTCAA AAATCATTGC TTATGTAAAA CATCTTCCCG TCATCTTAAA ACCGGCCTTA
ACCATCGAGG AGCAGGCACT GAGCTCGCTG AAAAAAATCA TTATTCTGTT TCGAACACAG
ACCGGACATG ATTTTTCACT CTACAAGAAA AACACGATTT ATCGCCGCAT CGAACGGCGC
ATGGGTATTC ACGAAATTGA AAAAATCTCT ACCTATGTCC ATTTTTTACA GACGAATCCC
CAGGAAATCG AGCTGCTTTT CAAGGAGCTG CTGATAGGGG TAACCAGCTT TTTCCGGGAT
CCTGATGCCT GGGAAATTCT TAAAAAAGAT GGCATACCCT CCATTCTCGC ATCCCGTCCA
TCTGGCGGTA TTATTCGGGC CTGGGTGGCA GGATGTTCAA CAGGTGAAGA GGCCTATTCC
CTCGCGATTG TCTTCAGAGA AGTCCTTGCA ACAACAAAGC ATCCCGGCAA TTTCAAGCTC
CAGATCTTTG CAACAGACCT CGACAAAAAT GCCATTGAAA AAGCCCGAAC AGGAATCTAT
CCATCCAATA TTACTGCTGA TGTTTCTGCG GAGCGTATCA GTCAATACTT TGAAAAAGAT
GACCGGGGCT ACAGAATTAC AAGAGCGATT CGCGAAACCA TTGTCTTTGC TCCCCATAAC
GTTATTATGG ATCCACCCTT CAGCAAGGTC GATATTCTCG TTTGCCGCAA TCTGCTGATT
TACATGGAGC AAGAGCTGCA GAAAAAACTG ATCCCGTTAT TTCATTACAG CCTTAATCCC
GGCGGAATCC TCTTTCTTGG AAGCGCTGAA ACAATCGGAT ACTGTGGCCA ACTGTTTCAG
ACTCTTGACA GCAAGGCCCG TCTTTTCCGT CATATGCATC AGGCAGAGAG GGCTGAGTAT
GTTGATTTCC CCGCATCTTT TACCCATCCT TTACACGACA GTTCAACTCT TCCGGTCACA
CAGGGCAAAC CGATGACATC CGATCTCAAC CTGAGTACCA TATGCGATAA GCTCCTGCTC
CAGTATTATA CTCCCGCAGC AGTACTGACC AATGAGCATG GCGACATTCT CTACATAAGC
GGTCGTACAG GGAACTACCT CGAACCAGCA GCAGGAAAAG CAAACCTGAA CATCTTCGCA
ATGGCAAGGG AAGGGATTGG CTATGAGCTG AATATTCTGA TCAGAAATGT GCTCCGCGAG
AAAGGCGAGA TTTCCAAAAC GGGAGTGGCA GTCGGAACAA ACGGAGGAAC AAAAATCATT
GACCTGACCG TCAGGTTGAT TGAAAAACCG GATTCCCCTA AAAACATGCT CATGATTGTT
TTTACCGAAG TTGCAAAAAA AACAGCAGAA AATCTGGATC AGAATCCCGT TGCAGATTTC
AATGACCGGA GGCTTGCCTC ACTTGCTGAA GAACTCAAAC AAGCAAAAGA GGAAATTATC
ACCATACGTG AAGAGATGCA GACCTCGGAG GAGGAACTGA AAAGCACGAA TGAAGAGATG
CAGTCAGCCA ATGAGGAGAT GCAGAGTACC AATGAAGAGT TAACCACATC AAAAGAGGAG
ATGCAGTCGC TGAACGAAGA GCTGCAGACG GTTAACCATG AACTGCAATC AAAAGTGACT
GACCTTTCAC AGGCCAACAA TGACATGAAA AACCTGCTGA ACAGCACGGA CATTGCAACA
CTTTTTCTTG ATGATGAGCT CAACATACGA CGCTTCACCA ACCGGACATC ATCCATCATC
AAACTCATTG CAAGCGATGT TGGACGTCCC ATAACCGATA TTGTTACCGA ACTGCAATAT
CCTGCACTGC TTGAAGATGC CCGCGAGGTT CTTCATACTC TTGTTTTCAG TGAAAAACAG
GTTTCTGCAA GTAACAATCG GTGGTTTAGC GTCAAGATCA TGCCCTATCG AACACAGGAA
AACCGTATTA ACGGCCTGGT AATTACCTTT ACTGATATCA CTGTCGCCAA GAAACTCGAA
ACAAGTCTGC GAGAGATTGA GAAGAGTTTC CGTTTTGTGA TTGACACCAT GCCTGTTGCG
ATTATCGTTC ATCAGGCCGA AGGATGTATT ACAATGACAA ATCAAGAGGC CGAGCGAATT
ACAGGAATTT CCATGAAAGA GATGCTCGGT AAAAATATTG CCGATCTTGG ATGGAAACTG
CTCAAGGCAG ACGGCTCAGA ATTGCCTCCC GAGGAAAACC CTGTTGTGGA CGCATTGCGC
TCCGGCAAGA CGATAAACGG AGTCGTTATC GGCATTATCC ACGCCCAGGA TCGCAAAACA
CGATGGATTA AAATCAGTAA CTCGAACAGA TTACAAGATG AAGAGGACAA AAACAGCCAC
CTCTTTACAA CATTTTTTGA AATAAATAAC CCGAATTCCT GA
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| Protein sequence | MTKTPASSQK IKASEEHALK SEEKIPFPVV GIGSSAGGLE ALELFLKHVP YPCGMAFVII
QHLDPTHKGI MVELLQRETA MPVCQVSDNL EIEPDHVYLI PPNQDMSILH GKLFLLDMVK
PRGLRLPIDF FFRSMADDLK QHSIGVILSG MGSDGTLGLR AIKEKGGGVF VQDPASAKFD
GMPRSAIDEG LADVIVPAEN LPSKIIAYVK HLPVILKPAL TIEEQALSSL KKIIILFRTQ
TGHDFSLYKK NTIYRRIERR MGIHEIEKIS TYVHFLQTNP QEIELLFKEL LIGVTSFFRD
PDAWEILKKD GIPSILASRP SGGIIRAWVA GCSTGEEAYS LAIVFREVLA TTKHPGNFKL
QIFATDLDKN AIEKARTGIY PSNITADVSA ERISQYFEKD DRGYRITRAI RETIVFAPHN
VIMDPPFSKV DILVCRNLLI YMEQELQKKL IPLFHYSLNP GGILFLGSAE TIGYCGQLFQ
TLDSKARLFR HMHQAERAEY VDFPASFTHP LHDSSTLPVT QGKPMTSDLN LSTICDKLLL
QYYTPAAVLT NEHGDILYIS GRTGNYLEPA AGKANLNIFA MAREGIGYEL NILIRNVLRE
KGEISKTGVA VGTNGGTKII DLTVRLIEKP DSPKNMLMIV FTEVAKKTAE NLDQNPVADF
NDRRLASLAE ELKQAKEEII TIREEMQTSE EELKSTNEEM QSANEEMQST NEELTTSKEE
MQSLNEELQT VNHELQSKVT DLSQANNDMK NLLNSTDIAT LFLDDELNIR RFTNRTSSII
KLIASDVGRP ITDIVTELQY PALLEDAREV LHTLVFSEKQ VSASNNRWFS VKIMPYRTQE
NRINGLVITF TDITVAKKLE TSLREIEKSF RFVIDTMPVA IIVHQAEGCI TMTNQEAERI
TGISMKEMLG KNIADLGWKL LKADGSELPP EENPVVDALR SGKTINGVVI GIIHAQDRKT
RWIKISNSNR LQDEEDKNSH LFTTFFEINN PNS
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