Gene Pput_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2003 
Symbol 
ID5192625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2266231 
End bp2267052 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID640586461 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_001267327 
Protein GI148547225 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0541882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTAGCG AACGCAACAC CGACATCGAG ATCCGACTGC TGATCGAGGC GATCTACCTC 
AAGTACAGCT ACGATTTCCG CAATTATTCC GGCGCTTCGA TCAAGCGTCG GATCCTCCAC
GCGCTGCGTC AGTTCGATTG CCTGACGGTG TCTGCGCTGC AGGAGCGTGT GCTGCACGAC
CCGGGCATGT TCATGCAACT GCTGCAGTAC CTGACGATCC CGGTCAGCGA GATGTTCCGT
GACCCTGACC ACTTCCTTGC CGTGCGCAAC GAAGTGGTGC CGTTGCTGCG TACCTGGCCC
TCGATCAAGG TCTGGATCGC GGGCTGCAGC ACGGGGGAAG AGGTGTATTC CATGGCCATC
CTGTTGCGTG AGGAAGGGCT GCTTGAGCGC ACCATCATCT ACGCCACCGA CATCAACCCG
CATTCGCTGG ACAAGGCCAA GCAGGGCATC TACTCGATGC AGAGCATGCG CGAATACGAG
GAAAACTACC GCCTGGCCGG TGGCCGCCGA GACTTCGCCG AGTACTACAC CGCCGCCTAT
GGCAACGCCA TCATGGACAG CAGCCTGCGC GACAATGTCA CCTTCGCCGA CCACAGCCTG
GCCACCGACA GCGTGTTCTC CGAGACCCAG TTGGTGTCGT GCCGCAATGT GCTGATCTAC
TTCAACAAGG ACCTGCAGGA TCGGGCGCTG GGCCTGTTCC ATGAGTCGCT CTGCCACCGT
GGTTTCCTGG TGCTGGGTAG CAAGGAGTCG GTGGACTTTT CGGCCTACAG CGATCGTTTC
GAGCCGCTGG TCAAGCCTCA ACGGATCTTC CGTAAATCAT GA
 
Protein sequence
MTSERNTDIE IRLLIEAIYL KYSYDFRNYS GASIKRRILH ALRQFDCLTV SALQERVLHD 
PGMFMQLLQY LTIPVSEMFR DPDHFLAVRN EVVPLLRTWP SIKVWIAGCS TGEEVYSMAI
LLREEGLLER TIIYATDINP HSLDKAKQGI YSMQSMREYE ENYRLAGGRR DFAEYYTAAY
GNAIMDSSLR DNVTFADHSL ATDSVFSETQ LVSCRNVLIY FNKDLQDRAL GLFHESLCHR
GFLVLGSKES VDFSAYSDRF EPLVKPQRIF RKS