Gene Pnap_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1072 
Symbol 
ID4687904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1138518 
End bp1139429 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID639834072 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_981310 
Protein GI121603981 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0475353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.619503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA AAGCAAAAAT CCCGGACTGG CCTGCGTGGG GCAGCGCCCC GCTGGGCAAC 
CCGGCGGCAG CCGTGCCGGA GGCAAGCGCG ACCGAGACGG AACTGCGCCT GCTGATGGAA
GCGATATACC GTCAGTACAG CTACGATTTC CGCGACTATG CAGGCGCATC GCAAAAGCGC
CGGGTGCTTC AGGCACTGGC GCAATTCGAC TGCCCGACGA TCCCGGCCCT GCAGGCCGGC
ATCCTGCAAG ACCCAAGCCT GTTCATGCGG CTGCTGCAGT ACCTGACGAT TCCGGTCAGC
GAGATGTTCC GCGACCCGAC TTTTTTCCTC GCCTTGCGCC AGCAGGTGAT ACCGCTGCTT
CAAACCTATC CTTCCATCAA GATATGGATA GCCGGCTGCA GCACTGGCGA AGAAGCATAT
TCGCTGGCCA TCCTGCTCAG GGAAGAAGGC CTGCTGGAGC GCACGCTGAT TTACGCGACC
GACATCAACG CCCGCTCGCT CGACAAGGCC CGCCAGGGTA TTTTTTCGCT GGGCAGCATC
AAAGACCACA CCGCCAATTA CCAGAAAGCC GGCGGCAAGC AGGCGTTCTC AAGCTACTAC
ACCGCCGCTT ATGACGCAGC GATTTTCGAC AAGTCGCTGC GCGAGAACAT CATATTTGCC
GACCACAGCC TGGCGACCGA CAGCGTGTTT TCGGAAACCC AGCTGGTGCT GTGCCGCAAT
GTGCTGATCT ACTTCAACAA AAAGCTGCAG GACCGGGCGC TGGGCCTGTT TCATGAATCG
CTGAGCCATC GCGGCTTTCT GGGCCTGGGC AGCAAGGAGA GCATCGACTT TTCTTCTTAC
GCCACGCGCT TTGAGCCGCT GGTCAAGCCC GAACGGATTT TTCGCAAGTG CCTCAGCGCC
CTGCCCCGAT GA
 
Protein sequence
MPKKAKIPDW PAWGSAPLGN PAAAVPEASA TETELRLLME AIYRQYSYDF RDYAGASQKR 
RVLQALAQFD CPTIPALQAG ILQDPSLFMR LLQYLTIPVS EMFRDPTFFL ALRQQVIPLL
QTYPSIKIWI AGCSTGEEAY SLAILLREEG LLERTLIYAT DINARSLDKA RQGIFSLGSI
KDHTANYQKA GGKQAFSSYY TAAYDAAIFD KSLRENIIFA DHSLATDSVF SETQLVLCRN
VLIYFNKKLQ DRALGLFHES LSHRGFLGLG SKESIDFSSY ATRFEPLVKP ERIFRKCLSA
LPR