Gene Psyr_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2446 
Symbol 
ID3367963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2833881 
End bp2834723 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content55% 
IMG OID637652794 
ProductMCP methyltransferase, CheR-type:MCP methyltransferase, CheR-type 
Protein accessionYP_235523 
Protein GI66045682 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.676059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0010522 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAGCC CGGACCGCAC CATGCACCGT GATCGAAGCA TGGATATCGA GCTGCGCCTG 
CTGATCGAGG CGATTTACCT TCAATACAGC TACGACTTTC GTGATTACTC CGGCGCTTCG
GTCAAGCGTC GCGTGATCCA TGCGCTGCGT CAGTTCGATT GTGCGACCAT CTCCGCCCTG
CAGGAACGTG TGCTCCACGA TCCTGCAGCA TTCATGCAAC TGCTGCAGAC TCTCACGATT
CCGGTCAGTG AGATGTTCCG TGACCCGTCG CATTTTCTGG CAATCCGCAA CGAGGTCGTG
CCGGTACTGC GCACCTACCC ATCACTCAAG GTGTGGATTG CCGGTTGCAG CACGGGCGAG
GAGGTCTATT CCACGGCTAT TCTGTTGCGC GAGGAGGGGC TGTTGGAGCG GACCATCATC
TATGCGACCG ATATCAACCC CAGCTCGCTG GAAAAGGCCA AGCAGGGCAT CTTCTCCATG
GACAACGTGC GGGCCTATGC CGAGAACTAT CGAAAGGCGG GAGGGCAGCG CGATTTTGCC
GAGTACTACA CGTCTGCCTA TGACTATGCG ATCTTCGACA AGACGCTGTG CGAGAACGTC
ACGTTTGCCG ATCACAGTCT GGCCACAGAT AGTGTATTCT CCGAAACGCA ATTTATTTCT
TGTCGTAACG TACTGATTTA TTTCAACAAA AAGCTTCAGG ATCGAGCGTT CGGGCTGTTT
CATGATTCGT TGTGCCATCG TGGCTTTCTG GCGTTGGGCA GCAAGGAAAC CCTGGATTTC
TCCGCCTACG GTGGCGCCTT CGAGGCGCTG GTGAAGCCCG AGCGGATTTA CCGGAAATTA
TGA
 
Protein sequence
MTSPDRTMHR DRSMDIELRL LIEAIYLQYS YDFRDYSGAS VKRRVIHALR QFDCATISAL 
QERVLHDPAA FMQLLQTLTI PVSEMFRDPS HFLAIRNEVV PVLRTYPSLK VWIAGCSTGE
EVYSTAILLR EEGLLERTII YATDINPSSL EKAKQGIFSM DNVRAYAENY RKAGGQRDFA
EYYTSAYDYA IFDKTLCENV TFADHSLATD SVFSETQFIS CRNVLIYFNK KLQDRAFGLF
HDSLCHRGFL ALGSKETLDF SAYGGAFEAL VKPERIYRKL