Gene Slin_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1030 
Symbol 
ID8724760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1250954 
End bp1251781 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content49% 
IMG OID 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_003385880 
Protein GI284035950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.206516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG ATTACGATTT AAGTACGTCT GAACTGGAAG AAATCCTTAC CCTTATCAAA 
CTGATACATG GGTACGACTT CACAAATTAT GCACAAACGT CGCTGAAACG TCGAATTGTT
CGGTGCATGG GACTAGCCCA TATCCGAACC GCTTCGGAAC TTCGCTTTCA ACTGGCAAAC
GATACCGCCT TTTTTGACTG GTTCCTCCAG TCGATCATGG TTAACGTAAC TGAAATGTTT
CGGGACCCTA CTTTCTATCG GACCCTACGC GAGAAAGTTC TGCCCCTGCT GGCTTCCTAC
CCGATCATCA AAATATGGCA TGCGGGCTGC TCCACAGGCG AGGAAGTATA CTCAATGGCG
ATTCTTCTTA AAGAAGCGAA TCTGCTGGAA CGATGCCGGC TTTACGCTAC GGACATTAAC
CCGGCGAATC TGGAAAAAGC CCGGTTGGGC CTGATTCCAG TGCAGCACCT CACTGACTAT
ACCGCTGGCT ACCGGCAGGC GGGTGGACAG CGTGACTTTG AGGATTATTA CACCTTACAT
GGCAACCACA TCCAGATGCA CAAGACGCTG CGGGACTCCA TTCTATTCGC GCAGCATAAC
CTCGTTACTG ATCGTGTTTT CAACGAATTC CAACTGGTGT GCTGCCGTAA CGTGTTGATC
TATTTCAACA AAGACCTGCA AAATCACGTC ATCCGGCTTT TTCATGATAG CCTTGCCCCG
CTTGGTTTTC TGGCCATTGG TACCAAAGAA TCGCTCTTGT TCACGGACTT GCGCGATCAG
TTTGCGGCCA TCGTTCCCGA CACAAAAATA TTCCGTCGTA CCCGATAA
 
Protein sequence
MNPDYDLSTS ELEEILTLIK LIHGYDFTNY AQTSLKRRIV RCMGLAHIRT ASELRFQLAN 
DTAFFDWFLQ SIMVNVTEMF RDPTFYRTLR EKVLPLLASY PIIKIWHAGC STGEEVYSMA
ILLKEANLLE RCRLYATDIN PANLEKARLG LIPVQHLTDY TAGYRQAGGQ RDFEDYYTLH
GNHIQMHKTL RDSILFAQHN LVTDRVFNEF QLVCCRNVLI YFNKDLQNHV IRLFHDSLAP
LGFLAIGTKE SLLFTDLRDQ FAAIVPDTKI FRRTR