| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3336 |
|---|
| Symbol | |
|---|
| ID | 8359502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4100856 |
|---|
| End bp | 4101689 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644965509 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_003123004 |
|---|
| Protein GI | 256422351 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00537558 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATA GCCTACGCCA TTTGAAGGAT GAGGATGTTT TAGTACTGTT AAATGACTTG
CTGGAGCAAT ATGGATATGA CTTTACAGAT TATTCATTCG CCTCAGTAAA ACGCAGGTTG
CAGCGTGTAT ATAGTGCAGA CAGATTCCCC AGTTTTGCTG AGTTCCGCTA CAGGGTGAAA
TCGGACCCCG AATATCTCAT CTATCTCATG GAACAGATCA CGGTCAATGT AACAGAAATG
TTCAGGGACC CTCATTTCTT TGAGATCCTC CGTAAACAGG TATTACCGGT ACTGGCCACC
TATCCCCTGA TCAGGATATG GCATGCTGGT TGTTCAACAG GAGAGGAGGT CTATTCCATG
GCGATCCTGC TCGATGAACT GAACCTGCTG CATAAATCTG TTATTTATGC TACGGATATC
AATGAAAGTG TGCTGGAGAA AGCCCGTAAA GGCATCTTCC CCCTGCAACA TATGCAGCAG
TATTCGCAGA ACTACCTGGC TTCCGGCGGA CAGCAGGAGT TTTCCGCTTA CTATGCAGCC
AATTATGAAT ATGCGAAGTT CACCGACAGG TTACGTGAGA AGATCATCTT TGCGGCACAT
AACCTCGTGA CAGACCACTC CTTTAACGAG TTTCAGCTGA TCATCTGCCG GAATGTACTG
ATCTATTTTA ACAAGGAATT GCAGGATAAA GTATTACATC TCTTCAGCGA CAGCCTGGAA
CAACTGGGAT TCATGGCCTT GGGCGCTAAA GAAACGCTCC GCTTTACCAC GGTAGCGCCA
TTATTCAAAC CCTTTGCAAA CAAAGAAAAG ATCTGGAGAA AAATTTCGAC ATGA
|
|---|
| Protein sequence | MMDSLRHLKD EDVLVLLNDL LEQYGYDFTD YSFASVKRRL QRVYSADRFP SFAEFRYRVK
SDPEYLIYLM EQITVNVTEM FRDPHFFEIL RKQVLPVLAT YPLIRIWHAG CSTGEEVYSM
AILLDELNLL HKSVIYATDI NESVLEKARK GIFPLQHMQQ YSQNYLASGG QQEFSAYYAA
NYEYAKFTDR LREKIIFAAH NLVTDHSFNE FQLIICRNVL IYFNKELQDK VLHLFSDSLE
QLGFMALGAK ETLRFTTVAP LFKPFANKEK IWRKIST
|
|---|
| |