More than 300 homologs were found in PanDaTox collection
for query gene Krad_1672 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009664  Krad_1672  response regulator receiver protein  100 
 
 		 128 aa  244  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1748  response regulator receiver  43.2 
 
 		 123 aa  94  6e-19  Nocardioides sp. JS614  Bacteria  normal  0.122601  n/a   
 
 
-
 
NC_009523  RoseRS_3924  response regulator receiver modulated diguanylate cyclase  39.52 
 
 		 443 aa  88.2  4e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.350169  normal  1 
 
 
-
 
NC_007948  Bpro_0213  response regulator receiver domain-containing protein  43.9 
 
 		 128 aa  87.4  7e-17  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  44.63 
 
 		 377 aa  87  7e-17  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.0516082 
 
 
-
 
NC_013512  Sdel_1579  response regulator receiver  40.52 
 
 		 225 aa  86.7  1e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.410227  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  43.8 
 
 		 377 aa  85.1  3e-16  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  46.09 
 
 		 240 aa  85.1  3e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3221  response regulator receiver modulated diguanylate cyclase  38.71 
 
 		 443 aa  85.1  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0497788 
 
 
-
 
NC_007604  Synpcc7942_1815  response regulator receiver domain-containing protein  45.76 
 
 		 411 aa  84.7  4e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.800608  normal  0.49797 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  43.44 
 
 		 229 aa  84  6e-16  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  42.06 
 
 		 227 aa  83.6  8e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_009783  VIBHAR_03422  hypothetical protein  42.37 
 
 		 1128 aa  83.6  8e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_2044  response regulator receiver protein  36.52 
 
 		 123 aa  82.8  0.000000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.0300859  normal  0.405857 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  41.8 
 
 		 229 aa  82.8  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  41.53 
 
 		 1111 aa  83.2  0.000000000000001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_5215  two component transcriptional regulator, LuxR family  38.02 
 
 		 217 aa  82.8  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0840  response regulator receiver protein  40.94 
 
 		 132 aa  83.2  0.000000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  42.62 
 
 		 241 aa  82.4  0.000000000000002  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_008009  Acid345_3504  response regulator receiver protein  40.62 
 
 		 127 aa  82  0.000000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2360  response regulator receiver protein  41.53 
 
 		 523 aa  81.6  0.000000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1319  response regulator receiver protein  48.65 
 
 		 129 aa  81.3  0.000000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.22 
 
 		 236 aa  81.3  0.000000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  46.09 
 
 		 233 aa  81.6  0.000000000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_013730  Slin_1037  response regulator receiver protein  41.18 
 
 		 247 aa  81.3  0.000000000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0013  response regulator receiver modulated diguanylate cyclase  36.07 
 
 		 314 aa  81.3  0.000000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.992585 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  43.48 
 
 		 457 aa  81.3  0.000000000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  40 
 
 		 1127 aa  80.9  0.000000000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  39.85 
 
 		 229 aa  80.9  0.000000000000006  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
NC_013169  Ksed_21620  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  42.74 
 
 		 238 aa  80.5  0.000000000000007  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.019443  normal  0.0473518 
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  36.67 
 
 		 229 aa  80.5  0.000000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_009456  VC0395_0147  chemotaxis protein CheY  38.33 
 
 		 119 aa  80.5  0.000000000000008  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  36.75 
 
 		 221 aa  80.1  0.000000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.416641 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  43.48 
 
 		 239 aa  80.1  0.000000000000009  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  43.64 
 
 		 225 aa  80.1  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  45.22 
 
 		 235 aa  79.3  0.00000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_1056  DNA-binding response regulator  39.37 
 
 		 226 aa  79.3  0.00000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.775205  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  43.81 
 
 		 229 aa  79.7  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.258551 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  36.67 
 
 		 352 aa  79  0.00000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  42.74 
 
 		 241 aa  79.3  0.00000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  40.62 
 
 		 234 aa  79  0.00000000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  36.43 
 
 		 239 aa  79.3  0.00000000000002  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_013595  Sros_8872  response regulator receiver protein  44.74 
 
 		 234 aa  79.3  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal  1 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  36.43 
 
 		 239 aa  79.3  0.00000000000002  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  44.35 
 
 		 233 aa  79  0.00000000000002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1275  response regulator receiver modulated diguanylate cyclase  39.34 
 
 		 304 aa  79.3  0.00000000000002  Acidothermus cellulolyticus 11B  Bacteria  hitchhiker  0.00827298  normal  0.435617 
 
 
-
 
NC_008789  Hhal_0205  response regulator receiver protein  45.19 
 
 		 395 aa  79  0.00000000000002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1977  DNA-binding response regulator  37.5 
 
 		 229 aa  78.6  0.00000000000003  Bacillus cereus B4264  Bacteria  normal  0.166768  n/a   
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  42.52 
 
 		 234 aa  78.6  0.00000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_010803  Clim_0176  response regulator receiver protein  37.61 
 
 		 124 aa  78.6  0.00000000000003  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_0822  response regulator receiver  42.19 
 
 		 241 aa  78.6  0.00000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0530683  n/a   
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.53 
 
 		 239 aa  78.6  0.00000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1062  response regulator receiver protein  42.99 
 
 		 120 aa  78.6  0.00000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.58489  hitchhiker  0.0000344775 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  38.33 
 
 		 338 aa  78.2  0.00000000000004  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  44.34 
 
 		 230 aa  78.2  0.00000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  40.17 
 
 		 245 aa  78.2  0.00000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal  1 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  38.33 
 
 		 338 aa  78.2  0.00000000000004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  38.33 
 
 		 338 aa  78.2  0.00000000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3728  response regulator receiver protein  42.24 
 
 		 128 aa  77.8  0.00000000000004  Frankia sp. CcI3  Bacteria  normal  1  normal  0.445342 
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  42.45 
 
 		 229 aa  77.8  0.00000000000004  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_3717  KDP operon transcriptional regulatory protein KdpE  40.48 
 
 		 244 aa  78.2  0.00000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2208  multi-sensor hybrid histidine kinase  40.83 
 
 		 823 aa  78.2  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.73393 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  38.33 
 
 		 338 aa  78.2  0.00000000000004  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  43.97 
 
 		 230 aa  77.8  0.00000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  34.71 
 
 		 216 aa  77.8  0.00000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  42.74 
 
 		 326 aa  77.8  0.00000000000005  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.402703 
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.46 
 
 		 239 aa  77.8  0.00000000000005  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_009972  Haur_4113  response regulator receiver protein  39.82 
 
 		 126 aa  77.8  0.00000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0232733  n/a   
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  34.71 
 
 		 216 aa  77.8  0.00000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  38.53 
 
 		 359 aa  77.4  0.00000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2795  response regulator receiver protein  35.9 
 
 		 121 aa  77.4  0.00000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013204  Elen_3009  two component transcriptional regulator, winged helix family  42.5 
 
 		 236 aa  77.4  0.00000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.333093 
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  32.79 
 
 		 212 aa  77.4  0.00000000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007777  Francci3_0978  two component transcriptional regulator  42.06 
 
 		 321 aa  77.4  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  0.323902  normal  1 
 
 
-
 
NC_009428  Rsph17025_1924  two component transcriptional regulator  40.83 
 
 		 230 aa  77.4  0.00000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  0.399122 
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  43.48 
 
 		 242 aa  77.4  0.00000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.00000387016 
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  37.14 
 
 		 318 aa  77.4  0.00000000000006  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000000365539  n/a   
 
 
-
 
NC_011725  BCB4264_A1869  DNA-binding response regulator  39.42 
 
 		 232 aa  77.4  0.00000000000007  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_0649  response regulator receiver Signal transduction histidine kinase  37.93 
 
 		 387 aa  77.4  0.00000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  0.736737  normal  0.226718 
 
 
-
 
NC_007908  Rfer_2356  PAS/PAC sensor hybrid histidine kinase  38.84 
 
 		 602 aa  77  0.00000000000007  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  40 
 
 		 230 aa  77.4  0.00000000000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  43.81 
 
 		 229 aa  77  0.00000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_007604  Synpcc7942_0856  response regulator receiver domain-containing protein  40.19 
 
 		 120 aa  77  0.00000000000008  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0758877  normal  0.0586548 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  41.88 
 
 		 326 aa  77  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_4008  response regulator receiver  38.46 
 
 		 1374 aa  77  0.00000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.702059  normal  1 
 
 
-
 
NC_008312  Tery_4025  two component LuxR family transcriptional regulator  36.75 
 
 		 230 aa  77  0.00000000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.236685 
 
 
-
 
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  40.83 
 
 		 230 aa  77  0.00000000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4963  DNA-binding response regulator  37.7 
 
 		 232 aa  76.6  0.00000000000009  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  40.83 
 
 		 230 aa  77  0.00000000000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal  1 
 
 
-
 
NC_003909  BCE_5010  DNA-binding response regulator  37.7 
 
 		 232 aa  76.6  0.0000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  44.23 
 
 		 236 aa  76.3  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal  1 
 
 
-
 
NC_005945  BAS4745  DNA-binding response regulator  37.7 
 
 		 232 aa  76.6  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4605  DNA-binding response regulator  37.7 
 
 		 232 aa  76.6  0.0000000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.000000523811  n/a   
 
 
-
 
NC_007298  Daro_1632  response regulator receiver  38.84 
 
 		 123 aa  76.6  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8520  response regulator receiver protein  42.86 
 
 		 224 aa  76.3  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.697367 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  36.44 
 
 		 170 aa  76.6  0.0000000000001  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_009484  Acry_2951  two component transcriptional regulator  43.59 
 
 		 236 aa  76.6  0.0000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 		 377 aa  76.3  0.0000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  37.61 
 
 		 313 aa  76.6  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_009972  Haur_4115  response regulator receiver protein  35.71 
 
 		 311 aa  76.6  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
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