| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1056 |
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| Symbol | |
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| ID | 4202217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1204584 |
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| End bp | 1205264 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081937 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_695502 |
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| Protein GI | 110798695 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.775205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTAAGA TTTTGATTGT TGAAGATGAA GAAAAAATAG CAAGATTCAT AGAATTAGAG
TTAATTCATG AAGGATATAA AGTAATAAAA GCAGATAATG GGAGAACAGG TCTTGAAATT
GCAGAGAGAG GAGAAGTTGA CTTAATTATT CTAGATGTTA TGCTTCCAGA AATTAATGGT
CTTGAAGTAT TAAGAAGAAT CAGAAAGGTA TCAGAAGTTC CTATTATAAT GCTTACAGCA
AGAGATGCTG TAATGGATAA GGTTTCAGGT CTAGATGCTG GAGCTGATGA TTATATAACA
AAGCCTTTTG CTATAGAGGA ATTGCTTGCA AGAATAAGAA CAGCTCTTAA AAAGAGAGTA
TTTACAGTGA AAAAAGATGA AGATGTAATA AGATGTGGAT TATTAACCTT AGACAAGATG
AGACATAAAG TAATGTATGG TGATACAGAA ATAGAATTAA CTAATAGAGA ATTTACTTTG
TTGCAAATAT TAATGGAAAA CAAAAATATA GTATTAACTA GAGATGTACT TATAGAAAAG
GTATGTGGTT ATAACTATGT TGGAGAAACA AATGTAATAG ATGTTTACGT AAGATATTTA
AGAACAAAGA TTGACGATGT TTTTAAGGTT AAAATAATAA GTACAGTACG TGGTGTAGGA
TACGTAATAA AAGATGAGTA A
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| Protein sequence | MVKILIVEDE EKIARFIELE LIHEGYKVIK ADNGRTGLEI AERGEVDLII LDVMLPEING
LEVLRRIRKV SEVPIIMLTA RDAVMDKVSG LDAGADDYIT KPFAIEELLA RIRTALKKRV
FTVKKDEDVI RCGLLTLDKM RHKVMYGDTE IELTNREFTL LQILMENKNI VLTRDVLIEK
VCGYNYVGET NVIDVYVRYL RTKIDDVFKV KIISTVRGVG YVIKDE
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