Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2208 |
Symbol | |
ID | 4459509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2705147 |
End bp | 2707618 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702974 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_846325 |
Protein GI | 116749638 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.73393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTC ACAAGTTCAA GATGTACCGC GTTGCCCTGA TGTTTTTGAC CATCGTCCTG CTGCTGTCGG CCCTGGCGAT CATACCCCAG ATCGTTACCG TGAGGGGGGA AATCCTCATG GGAATCAACG TGGGCGTGGC GCTGCTCGGG CTGGTCGGCG GCCTCTTTTT CATCCGCCGG ATGAATCATC GGCTGGTGCT CATGGCCGAT GCCGCCAGGT CCATTGAAGA AGGGGACTAT TCGGCGCGCA CCGAGGTCAC CGGGGAGGAT GCCATCGGGA TGCTCGCCAG GACGATCAAT TCCATGGCGG AGAGGATCCA GTCGGCCTTC CGGGAGCTCG AACATCGACA GAACGATCTC GTTGAGAGCC GCAAGCTCCT GTCGGAACAG AACGCGAAAC TCGAACAGGA GTTCGAGAGG CAGGCGGCTT TCGGTGAATA CCTGGTCGCC CTGAACGCCG TGGACATCAA CGCCATCGCC GAGAAGACCC TGGAATACCT GCTGCGGGAA ACGGAAATGC ATTTCGGGAT TTTCTACCTG CGCGAAAGGG GCTCCGGAAA GCTGCAGCGG GTGGCGGAGC GCGGAATCGA TTCTCAGGCC CTGGCCGCCC TCACGAGGAC AGAGGATGGA TTTCCGGCTC AAGTGGTGTC CGAGCGCAAG TGGCTGACCA TCAAGGATAT CGATGAACAG GCCCTGCCCG AAGTGAACCT CGGATTCACC AGAGCCCGAC TGCGGAGCGT GTTGGGGGTG CCCGTCCTGT TTCAACAGAA AATCCTGGGG GTCCTGATCC TGTCGGCAAT GCACAAGCTT GACGATACGG TGAGGAGAAT CGTGGAAAGC ACGGTCGGCA CGCTCGGCAG TGCCCTCAAC AACGCCATGA CTTACAAGAC CGTGCAGCAG CAGGCCCTGC AACTGGAGCA GGCAAACATG GAGCTGCTCG AAGCCGATCA CCTGCGGAGC GAATTCGTGG CGAACATGAG CCACGAGCTG AGGACACCGC TCAACTCCAT CATCGGCTTT TCGGGACTCC TGATGAAAAA CCGGGGGGGC AATCTCGTCG CCACGGATCT GAGCTATGCC GAGAAAATCA ATCGCAACGG AAAGCATCTT CTGAACCTGA TCAACGATAT CCTGGACCTC TCGAAGATCG AGGCCGGCCG GATGGAGCTC CAAATCGGGC CCACGCGAAT CGACGTCCTC ACCAAGGAAG TGGTGGACAT GCTGCGGCCC CAGGCCGACG AACGAAATCT CTCCCTGACC TTCGAAACGG CGGGCGAGAT CCCGATGTTC GAGACGGATG GCGAGAAGCT CAAACGCGTC CTGATCAACC TGTTGGGAAA CGCCATCAAG TTCACGCACA AAGGCGGGGT CAAGGTGCGG TTGATCTCGC AGAGCGGGCA TCGGCTGAAC ATCGAAGTGA ACGATTCCGG CATCGGCATT CCCCAGGACA AGCTGGAAAC CATCTTCCAG CCCTTCCGGC AGGTCGACAG CAGCACCAGC CGCGAATACG GCGGAACGGG GCTGGGCCTG ACGATCACGC GATCTATCGT GGAAATGCTC CGTGGGGAAA TATCGGTGAG CAGCAAACCC GGAGAGGGCA GCACGTTCAC CGTGAGTCTT CCCCTCGGCG GCGACGCCGC AAGGCAACCG GCGCCGGCGG TTGAAGAACC GGCCGCACCC GTTGAGCCGC AGGAATTGGG GCCCGTTCCC CCCACTCTGC AATGGCCGGA AAGCCAGGCG CCCATCAAGG GAGCGCGCGT CCTGGTCGTC GATGACGATC CGGATTCCCG GGAACTGCTC ATGAACAACA TCGAAGGCAT GGGAGCCAAA GTGATTCCCT GCGAGGACGG TGAGAAGGCG CTCCAGATGG CCCTGGAATG CAAGCCGGAC CTCATCACCC TGGATCTCAT GATGCCCGGA ATGGACGGAT GGGAAGTGTT GAGCCGCCTG CGCGACAACC CCGAAACCCG TCACATTCCG GTGGTGATCA TCAGCATCGT CGCCAACCGG CGCCAGGCGA TGGTGCTCGG CGCGGTCGAC GCCCTCACCA AACCGATCTC GAGCAACCAG CTCCAGGCGC TCCTGCAGCA TTACGTCCGC CGGCAGTCGG TGAGCAAGGT CCTGGTGGTC GACGACGACG AGGATGCCAG GCAGCTGCTC GCTTCTCACC TGGAAAACAA GGTGGGAGAG CTTCGCACGG CCGTGAACGG CCGCGAAGCG CTGCAGGTGC TCGAAGAGTT CACTCCGGAC CTGATTTTCC TCGACCTCAA CATGCCCCAG ATGGACGGTT TCACGTTTCT GCGCGTGTTG AGGGCCGATA AGCACCTGTG GCGGCTGCCG GTGGTGGTGG TGACGGCCAA GCAGATGACC GCCGCGGAAC GCCGCGAACT TGAACGGAGG GTCGTCGGAT TCATCCAGAA AGGCGATTCT CTGGAAACAC AATTGCAAGA GGTACTTCAC TATGTCGGAT AG
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Protein sequence | MKSHKFKMYR VALMFLTIVL LLSALAIIPQ IVTVRGEILM GINVGVALLG LVGGLFFIRR MNHRLVLMAD AARSIEEGDY SARTEVTGED AIGMLARTIN SMAERIQSAF RELEHRQNDL VESRKLLSEQ NAKLEQEFER QAAFGEYLVA LNAVDINAIA EKTLEYLLRE TEMHFGIFYL RERGSGKLQR VAERGIDSQA LAALTRTEDG FPAQVVSERK WLTIKDIDEQ ALPEVNLGFT RARLRSVLGV PVLFQQKILG VLILSAMHKL DDTVRRIVES TVGTLGSALN NAMTYKTVQQ QALQLEQANM ELLEADHLRS EFVANMSHEL RTPLNSIIGF SGLLMKNRGG NLVATDLSYA EKINRNGKHL LNLINDILDL SKIEAGRMEL QIGPTRIDVL TKEVVDMLRP QADERNLSLT FETAGEIPMF ETDGEKLKRV LINLLGNAIK FTHKGGVKVR LISQSGHRLN IEVNDSGIGI PQDKLETIFQ PFRQVDSSTS REYGGTGLGL TITRSIVEML RGEISVSSKP GEGSTFTVSL PLGGDAARQP APAVEEPAAP VEPQELGPVP PTLQWPESQA PIKGARVLVV DDDPDSRELL MNNIEGMGAK VIPCEDGEKA LQMALECKPD LITLDLMMPG MDGWEVLSRL RDNPETRHIP VVIISIVANR RQAMVLGAVD ALTKPISSNQ LQALLQHYVR RQSVSKVLVV DDDEDARQLL ASHLENKVGE LRTAVNGREA LQVLEEFTPD LIFLDLNMPQ MDGFTFLRVL RADKHLWRLP VVVVTAKQMT AAERRELERR VVGFIQKGDS LETQLQEVLH YVG
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