More than 300 homologs were found in PanDaTox collection
for query gene Gbro_0822 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_0822  response regulator receiver  100 
 
 
241 aa  491  9.999999999999999e-139  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0530683  n/a   
 
 
-
 
NC_009338  Mflv_1581  two component transcriptional regulator  80.18 
 
 
238 aa  380  1e-105  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5175  two component transcriptional regulator  80.18 
 
 
236 aa  380  1e-104  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  75 
 
 
235 aa  374  1e-103  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10772  two component system response transcriptional positive regulator phoP  76.69 
 
 
247 aa  372  1e-102  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.864575 
 
 
-
 
NC_008146  Mmcs_4590  two component transcriptional regulator  77.97 
 
 
239 aa  373  1e-102  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4678  two component transcriptional regulator  77.97 
 
 
239 aa  373  1e-102  Mycobacterium sp. KMS  Bacteria  normal  0.337028  normal  0.895878 
 
 
-
 
NC_009077  Mjls_4973  two component transcriptional regulator  77.97 
 
 
239 aa  373  1e-102  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  62.87 
 
 
240 aa  318  7e-86  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0578  two component transcriptional regulator, winged helix family  62.72 
 
 
244 aa  300  9e-81  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8879  response regulator receiver protein  61.95 
 
 
235 aa  292  3e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  0.103439  normal 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  60.18 
 
 
233 aa  289  3e-77  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  60.18 
 
 
233 aa  288  7e-77  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  58.15 
 
 
252 aa  285  4e-76  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  57.27 
 
 
248 aa  280  1e-74  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  57.71 
 
 
273 aa  275  6e-73  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal 
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  59.05 
 
 
242 aa  273  2.0000000000000002e-72  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000387016 
 
 
-
 
NC_013947  Snas_5144  two component transcriptional regulator, winged helix family  58.41 
 
 
236 aa  271  6e-72  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.204078  normal  0.858106 
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  57.51 
 
 
239 aa  271  7e-72  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  57.58 
 
 
236 aa  271  9e-72  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_013169  Ksed_21620  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  58.59 
 
 
238 aa  270  2e-71  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.019443  normal  0.0473518 
 
 
-
 
NC_013174  Jden_2051  two component transcriptional regulator, winged helix family  55.13 
 
 
236 aa  268  4e-71  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8872  response regulator receiver protein  59.03 
 
 
234 aa  268  7e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  53.81 
 
 
406 aa  268  7e-71  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  55.65 
 
 
237 aa  268  7e-71  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  58.67 
 
 
239 aa  265  2.9999999999999995e-70  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  57.08 
 
 
239 aa  266  2.9999999999999995e-70  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  57.46 
 
 
234 aa  265  4e-70  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  54.47 
 
 
243 aa  264  1e-69  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0005  response regulator  54.81 
 
 
243 aa  261  8.999999999999999e-69  Bifidobacterium longum DJO10A  Bacteria  normal  0.201532  n/a   
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  52.4 
 
 
246 aa  261  8.999999999999999e-69  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal 
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  52.84 
 
 
231 aa  259  2e-68  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  52.86 
 
 
236 aa  259  2e-68  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  55.6 
 
 
241 aa  257  1e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  55.74 
 
 
239 aa  256  2e-67  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  54.63 
 
 
271 aa  256  3e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_009921  Franean1_6588  two component transcriptional regulator  53.98 
 
 
229 aa  254  1.0000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  0.13217  normal 
 
 
-
 
NC_009953  Sare_0219  two component transcriptional regulator  55.07 
 
 
237 aa  253  2.0000000000000002e-66  Salinispora arenicola CNS-205  Bacteria  normal  0.127265  hitchhiker  0.00333518 
 
 
-
 
NC_013721  HMPREF0424_0720  response regulator receiver domain protein  51.26 
 
 
246 aa  252  4.0000000000000004e-66  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.351492 
 
 
-
 
NC_007777  Francci3_0234  two component transcriptional regulator  51.26 
 
 
242 aa  250  2e-65  Frankia sp. CcI3  Bacteria  normal  normal  0.925989 
 
 
-
 
NC_014165  Tbis_3267  winged helix family two component transcriptional regulator  55.46 
 
 
229 aa  249  3e-65  Thermobispora bispora DSM 43833  Bacteria  normal  0.0891778  normal  0.213955 
 
 
-
 
NC_011886  Achl_0899  two component transcriptional regulator, winged helix family  56.65 
 
 
236 aa  248  5e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.383063 
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  54.39 
 
 
233 aa  247  1e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5255  two component transcriptional regulator, winged helix family  55.95 
 
 
242 aa  246  3e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0134474  normal 
 
 
-
 
NC_009921  Franean1_6496  two component transcriptional regulator  55.16 
 
 
231 aa  244  9.999999999999999e-64  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00132974  normal  0.338684 
 
 
-
 
NC_014151  Cfla_3340  two component transcriptional regulator, winged helix family  48.98 
 
 
258 aa  242  3e-63  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0454745 
 
 
-
 
NC_007777  Francci3_0308  two component transcriptional regulator  52.61 
 
 
239 aa  242  5e-63  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6507  two component transcriptional regulator  51.95 
 
 
270 aa  239  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  0.0763131  normal  0.20607 
 
 
-
 
NC_011886  Achl_0804  two component transcriptional regulator, winged helix family  49.17 
 
 
246 aa  238  5.999999999999999e-62  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  50.43 
 
 
255 aa  236  2e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_013093  Amir_0379  two component transcriptional regulator, winged helix family  51.75 
 
 
233 aa  235  6e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.605912  n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  52.61 
 
 
249 aa  234  1.0000000000000001e-60  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_008541  Arth_0655  two component transcriptional regulator  48.76 
 
 
246 aa  234  1.0000000000000001e-60  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  52.61 
 
 
250 aa  233  2.0000000000000002e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
NC_009565  TBFG_13797  two component transcriptional regulatory protein  51.3 
 
 
286 aa  233  2.0000000000000002e-60  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.173423 
 
 
-
 
NC_013235  Namu_4688  two component transcriptional regulator, winged helix family  52.86 
 
 
252 aa  232  5e-60  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1724  two component transcriptional regulator, winged helix family  52.63 
 
 
243 aa  232  5e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  47.33 
 
 
241 aa  230  1e-59  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_013235  Namu_4408  two component transcriptional regulator, winged helix family  50.22 
 
 
230 aa  228  4e-59  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3926  two component transcriptional regulator  51.98 
 
 
254 aa  228  6e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4000  two component transcriptional regulator  51.98 
 
 
254 aa  228  6e-59  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3941  two component transcriptional regulator  51.98 
 
 
254 aa  228  6e-59  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0990172 
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  47.83 
 
 
257 aa  223  2e-57  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_22060  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.02 
 
 
254 aa  221  6e-57  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0729677  n/a   
 
 
-
 
NC_009380  Strop_1418  response regulator receiver  49.12 
 
 
251 aa  217  2e-55  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0582944 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  48.44 
 
 
231 aa  216  2.9999999999999998e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.312171 
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  48 
 
 
231 aa  214  9.999999999999999e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  45.42 
 
 
246 aa  213  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_009953  Sare_1384  two component transcriptional regulator  48.9 
 
 
252 aa  213  2.9999999999999995e-54  Salinispora arenicola CNS-205  Bacteria  decreased coverage  0.00801111  normal  0.0620226 
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  50 
 
 
230 aa  211  7e-54  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  48 
 
 
230 aa  211  7.999999999999999e-54  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  48 
 
 
230 aa  211  7.999999999999999e-54  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  48 
 
 
230 aa  211  7.999999999999999e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
NC_014210  Ndas_1823  two component transcriptional regulator, winged helix family  52.42 
 
 
241 aa  211  9e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.506413  normal 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  49.33 
 
 
228 aa  211  1e-53  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  48.44 
 
 
227 aa  210  1e-53  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_013131  Caci_6147  two component transcriptional regulator, winged helix family  45.45 
 
 
244 aa  208  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.200947 
 
 
-
 
NC_013093  Amir_2632  two component transcriptional regulator, winged helix family  46.67 
 
 
229 aa  207  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0759  two component transcriptional regulator  45.58 
 
 
223 aa  207  2e-52  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00128917  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  43.17 
 
 
224 aa  206  3e-52  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_013131  Caci_0208  two component transcriptional regulator, winged helix family  45.13 
 
 
238 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  45.02 
 
 
236 aa  202  5e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_014151  Cfla_0569  two component transcriptional regulator, winged helix family  46.7 
 
 
248 aa  201  8e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00419725 
 
 
-
 
NC_013216  Dtox_1377  two component transcriptional regulator, winged helix family  46.93 
 
 
225 aa  199  1.9999999999999998e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000000301655 
 
 
-
 
NC_011773  BCAH820_2240  DNA-binding response regulator  42.92 
 
 
227 aa  197  1.0000000000000001e-49  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.85177e-28 
 
 
-
 
NC_005945  BAS2056  DNA-binding response regulator  42.92 
 
 
227 aa  197  1.0000000000000001e-49  Bacillus anthracis str. Sterne  Bacteria  normal  0.413172  n/a   
 
 
-
 
NC_007530  GBAA_2212  DNA-binding response regulator  42.92 
 
 
227 aa  197  1.0000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2194  DNA-binding response regulator  42.92 
 
 
227 aa  197  2.0000000000000003e-49  Bacillus cereus B4264  Bacteria  hitchhiker  0.00702475  n/a   
 
 
-
 
NC_013159  Svir_32770  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  49.78 
 
 
229 aa  196  2.0000000000000003e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.599916  normal 
 
 
-
 
NC_013947  Snas_2095  two component transcriptional regulator, winged helix family  44.16 
 
 
256 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  44.25 
 
 
224 aa  193  2e-48  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  40.09 
 
 
225 aa  193  2e-48  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  44.69 
 
 
224 aa  193  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0323  two component transcriptional regulator  43.5 
 
 
227 aa  193  2e-48  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  39.29 
 
 
224 aa  192  3e-48  Bacillus cereus G9842  Bacteria  normal  0.725953  normal 
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  39.21 
 
 
224 aa  192  4e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  42.48 
 
 
228 aa  192  5e-48  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  43.56 
 
 
224 aa  192  5e-48  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1005  two component transcriptional regulator, winged helix family  43.56 
 
 
227 aa  191  8e-48  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000255449  n/a   
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  44.25 
 
 
224 aa  191  9e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal 
 
 
-
 
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