Gene Francci3_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3728 
Symbol 
ID3903829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4463431 
End bp4463817 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID637881054 
Productresponse regulator receiver protein 
Protein accessionYP_482809 
Protein GI86742409 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.445342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCCTG CCACCCCCCG AGTCCTCGTC GTCGACGACG ACGCGGTGAT ACGTCAGCTC 
GTGGTCGTCA ACCTTGAGTT GGAGGGCTTT GAGGTCCATA CCGCCGTAGA CGGCGTGGAC
TGCCTGGAGA TGGTGCGCGA GATCGCCCCA CAGGTGATCA CGTTGGACAT CATGATGCCG
AGGATGAACG GCTGGGACGT GGCCGCCCGG CTGCGGGAGG AGCCGGACAC CGCCGCCATC
AAAATGATTA TGCTGACCGC CCGGGCCCAG GAGGCCGACG TCAAGCGTGG GATGCGGGTC
GGGGTGGACT ACTACCTGAC CAAGCCGTTC GACCCGGACG AACTCATCGG TGTGGTCCAG
CGGCTGGCTG CCGGCCAGCC GGTCTGA
 
Protein sequence
MYPATPRVLV VDDDAVIRQL VVVNLELEGF EVHTAVDGVD CLEMVREIAP QVITLDIMMP 
RMNGWDVAAR LREEPDTAAI KMIMLTARAQ EADVKRGMRV GVDYYLTKPF DPDELIGVVQ
RLAAGQPV