More than 300 homologs were found in PanDaTox collection
for query gene Gbem_2854 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1359  methyl-accepting chemotaxis sensory transducer  93.13 
 
 
524 aa  993    Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.05372e-22 
 
 
-
 
NC_011146  Gbem_2854  methyl-accepting chemotaxis sensory transducer  100 
 
 
524 aa  1064    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0241  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
393 aa  232  1e-59  Geobacter sp. M21  Bacteria  n/a    normal  0.0575576 
 
 
-
 
NC_011146  Gbem_0257  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
393 aa  228  2e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0916  methyl-accepting chemotaxis protein  35.37 
 
 
394 aa  218  2e-55  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.00484593  n/a   
 
 
-
 
NC_010814  Glov_3549  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
393 aa  193  7e-48  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00000818802  n/a   
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
392 aa  188  3e-46  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
392 aa  184  3e-45  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  36.1 
 
 
392 aa  182  2e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
388 aa  170  7e-41  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
537 aa  148  2.0000000000000003e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
544 aa  144  3e-33  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  30 
 
 
540 aa  143  6e-33  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  29.15 
 
 
543 aa  141  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  29.43 
 
 
547 aa  139  1e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
547 aa  139  1e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
423 aa  139  1e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
541 aa  137  5e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  35.86 
 
 
543 aa  137  6.0000000000000005e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  30 
 
 
546 aa  137  6.0000000000000005e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  27.64 
 
 
570 aa  136  7.000000000000001e-31  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  35.69 
 
 
541 aa  135  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
549 aa  134  3.9999999999999996e-30  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
549 aa  134  6e-30  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  30.18 
 
 
546 aa  133  6.999999999999999e-30  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  28.53 
 
 
541 aa  133  7.999999999999999e-30  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
520 aa  133  7.999999999999999e-30  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  28.3 
 
 
549 aa  132  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  28.77 
 
 
540 aa  133  1.0000000000000001e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  30 
 
 
535 aa  132  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  33.57 
 
 
637 aa  132  1.0000000000000001e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
557 aa  132  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  32 
 
 
540 aa  132  2.0000000000000002e-29  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  28.87 
 
 
549 aa  131  3e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  32 
 
 
540 aa  131  3e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  29.68 
 
 
535 aa  131  3e-29  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  30.32 
 
 
535 aa  131  4.0000000000000003e-29  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  29.61 
 
 
533 aa  130  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_008740  Maqu_2525  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
538 aa  131  4.0000000000000003e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
637 aa  130  6e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
640 aa  130  8.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  31.78 
 
 
541 aa  129  1.0000000000000001e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  31.53 
 
 
672 aa  129  1.0000000000000001e-28  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
674 aa  129  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  34.51 
 
 
695 aa  128  2.0000000000000002e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.46 
 
 
626 aa  128  2.0000000000000002e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  35.09 
 
 
541 aa  129  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  29.61 
 
 
659 aa  128  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  36.15 
 
 
538 aa  128  2.0000000000000002e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  29.37 
 
 
557 aa  128  3e-28  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
542 aa  127  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  34.86 
 
 
541 aa  127  5e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
543 aa  127  5e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2119  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
549 aa  127  6e-28  Enterobacter sp. 638  Bacteria  normal  normal  0.164628 
 
 
-
 
NC_011725  BCB4264_A0594  methyl-accepting chemotaxis protein  28.2 
 
 
658 aa  127  6e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0614  methyl-accepting chemotaxis protein  27.81 
 
 
658 aa  127  7e-28  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
650 aa  126  8.000000000000001e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  33.79 
 
 
541 aa  126  8.000000000000001e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
1079 aa  126  8.000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4745  methyl-accepting chemotaxis protein  28.7 
 
 
658 aa  126  9e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  32.84 
 
 
541 aa  126  9e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  28.01 
 
 
569 aa  125  1e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
674 aa  126  1e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  29.18 
 
 
549 aa  126  1e-27  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  30.18 
 
 
539 aa  125  2e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  31.53 
 
 
645 aa  125  2e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  32.03 
 
 
643 aa  125  2e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_013456  VEA_002443  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  31.15 
 
 
541 aa  125  2e-27  Vibrio sp. Ex25  Bacteria  unclonable  0.00000057049  n/a   
 
 
-
 
NC_005957  BT9727_0469  methyl-accepting chemotaxis protein  27.81 
 
 
658 aa  125  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.683606  n/a   
 
 
-
 
NC_006274  BCZK0469  methyl-accepting chemotaxis protein  27.81 
 
 
658 aa  125  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  29.28 
 
 
541 aa  125  2e-27  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  33.69 
 
 
535 aa  125  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  29.32 
 
 
547 aa  125  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009654  Mmwyl1_1465  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
538 aa  124  4e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0526  methyl-accepting chemotaxis protein  27.81 
 
 
658 aa  124  4e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
555 aa  124  4e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_007530  GBAA_0558  methyl-accepting chemotaxis protein  27.81 
 
 
658 aa  124  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  30.84 
 
 
555 aa  124  4e-27  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  33.54 
 
 
541 aa  124  5e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  28.98 
 
 
544 aa  124  5e-27  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  31.34 
 
 
541 aa  124  5e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
533 aa  124  6e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  30.95 
 
 
666 aa  124  6e-27  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
540 aa  124  6e-27  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_011146  Gbem_0040  methyl-accepting chemotaxis sensory transducer  28.8 
 
 
515 aa  123  7e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2240  histidine kinase, HAMP region: chemotaxis sensory transducer  32.23 
 
 
537 aa  123  8e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.942924 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  27.38 
 
 
528 aa  123  9e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_007492  Pfl01_2100  chemotaxis sensory transducer  32.64 
 
 
537 aa  123  9e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.517374  normal  0.435335 
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  28.74 
 
 
700 aa  123  9e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
636 aa  123  9.999999999999999e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
634 aa  122  9.999999999999999e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
596 aa  123  9.999999999999999e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.61 
 
 
632 aa  122  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_2737  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
452 aa  122  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00060467  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  33.6 
 
 
640 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  34.21 
 
 
541 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2998  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
549 aa  122  1.9999999999999998e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
422 aa  122  1.9999999999999998e-26  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
554 aa  122  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  32.98 
 
 
667 aa  122  1.9999999999999998e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
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