| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2854 |
|---|
| Symbol | |
|---|
| ID | 6779706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3284932 |
|---|
| End bp | 3286506 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642768848 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002139654 |
|---|
| Protein GI | 197119227 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTA TCTGGCACTA CTATCTCTGT CTCACCATCA AGACCAGGTT GATGATTTTA
TGCCTGTGCT ACAGCTTGTG CATCGTCGCT GCAACAGTTG CAGGTTCACT CGACTCACAG
ATCTGGCAGT GGGGACTGAC GATTTTGTTC ATCGCCATGG GCGCGCTATT CGGCGGCATC
AACATCTGGG GCATCACCAG TGCGATCGCG CGGACCATCA ACAACCTGGA GACGCTGGCA
CAGGGGAACC TCAGCCAGGA GATCGTAATC AAGCGCACCA ACGAGATCAG CAAACTCCTC
CACGCCATGC GCAAGATGGT CGGCAACCAG ACCGAGGTGC TGCGCAACAT CCACGGCGCC
AGCCTGCAGA TGGAACAGTC TTCCTTTCAG ATTTCCGAGA TCTCCAACGA GATAGCCGAT
AGCACCAAGG CACAGCAAGC GCAGGTGCTG CAGGTTTCCG AAGCAACCGG CGAGGTGCTC
ACGATTTCTT CATCGGTGCG CGAACTCTCC GATATGATGC TGAACGAATC CCTGGTGACC
GAAAAGGAGG CCGAACAAGG CCTTGACGCC ACCAACCAGA ACATCGACCA GATGCGTTTA
ACGGTCACCG AGGTAAACCG CGCAGCGGAA GAGACTTCGG GGTTGAACCA GGTGGCGGAG
GAGATCCACA AGATCATCGC CAGCATCACG GACATAGCGG ACCAGACCAA CCTTTTGGCG
CTCAATGCCG CCATCGAGGC CGCAAGGGCA GGAGAACAGG GTCGCGGCTT TGCCGTAGTG
GCCGACGAGG TCCGCAATCT CGCCACACGT ACCTCGAGGG AGACCCAAGA GATCACCAGG
ATCATCTCGT CCCTGGCGGA ACAGGTAACC GCTACCATGG GGACCATGGA ACGGATCGTC
GAACGCGTCA ACGGCGGCGA GCAAAAGACC CTGCAGACGG CCCAGATAAT ACAGAGCATG
GCCTCCTCCG TCCGCGAGAC CTCCGCGGCC AGCCGGCGCA TCTCCGATGC GAGCAAATCG
CAGATGGAGC GGCTCACGCA GTTGCAGCAA AGCCAGGAAT CGCTCTTCCA CACCATAAAG
GACAACGGGG CCAAGATCGG GGTCACCGCC ACCATCAGCG GGGACCTCAA CGCCGTCACC
AAGCAGTTCA ACCGCCTGCT GGACAACTTC ACCTTCAGTA CCGAAACCGA AATCGAGCGT
TCCGCGCGCG AGCAGCGGCA GTACCCGCGC GCGAACAACG GGCTTCTGGC CGTGATGCGC
GAGGCAGGCT CGCAGCAGGA GATCCAGGGA ATTACCAGCG ATTTCAGCAT GACCGGGCTC
CAGCTGCGCA TCGCCGCGCA GGCCGGCCTC AAAGAGGGGC AACTCGTCGA GGTGGAACTG
ATGACTCCCG GCACTTCCCT GGACGAATTC GAGCAACAGG AGCCGCTCAA GATCGCTGCG
CGGGTGGTGT GGCTCCGTAC CAACCATGAG GGTGCCGCCT GCGGCCTTGA ATTCAACCCC
CTGGTCCCGG CACAACAGCA GCGCCTGGAA GCCTGCTTCC GGCATTTCAA GAAGAACTCC
CGCTTCAAAA GCTAG
|
|---|
| Protein sequence | METIWHYYLC LTIKTRLMIL CLCYSLCIVA ATVAGSLDSQ IWQWGLTILF IAMGALFGGI
NIWGITSAIA RTINNLETLA QGNLSQEIVI KRTNEISKLL HAMRKMVGNQ TEVLRNIHGA
SLQMEQSSFQ ISEISNEIAD STKAQQAQVL QVSEATGEVL TISSSVRELS DMMLNESLVT
EKEAEQGLDA TNQNIDQMRL TVTEVNRAAE ETSGLNQVAE EIHKIIASIT DIADQTNLLA
LNAAIEAARA GEQGRGFAVV ADEVRNLATR TSRETQEITR IISSLAEQVT ATMGTMERIV
ERVNGGEQKT LQTAQIIQSM ASSVRETSAA SRRISDASKS QMERLTQLQQ SQESLFHTIK
DNGAKIGVTA TISGDLNAVT KQFNRLLDNF TFSTETEIER SAREQRQYPR ANNGLLAVMR
EAGSQQEIQG ITSDFSMTGL QLRIAAQAGL KEGQLVEVEL MTPGTSLDEF EQQEPLKIAA
RVVWLRTNHE GAACGLEFNP LVPAQQQRLE ACFRHFKKNS RFKS
|
|---|
| |