| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3549 |
|---|
| Symbol | |
|---|
| ID | 6369295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3818160 |
|---|
| End bp | 3819341 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642678964 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001953770 |
|---|
| Protein GI | 189426593 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000818802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCT TCCTCGATAA ATACTTGGGT TTAAAGATCA AGACCCGTAT TTACCTGCTC
TGCTTCTGTT ACAGCCTCTG CATCATCTTT GGTGTCGGGG CCGGCCGCTC ACTGCCCCTG
ACCTACTCAA TTCTGACCAC TGCCCTGTTT GTGGCAGCCG GTGCGTTCTT CGGCGGCCTG
CTGTTCTGGT CGGTCAATGA AGCCCTGCAG CGGATTCTGG GGTATCTGAA GGAGATGACC
GAGGGCAATC TGCGCCAGAC CATTTCGGCC AAGCGCAATA ACGAGATCAG CGCCATCATC
CGTTCCATCG CTACCCTGCA GACCGCCATG CAGGGCATGA TCTCCGGTAT CCGGCAGACA
ACCGACAGTG TTGCTTCAGC ATCGGAGCGG CTCCGTCAGA CGGCTGAAAG CATTGCCGAC
GGCACCGGCA GTGCTGCCTC CCAGTCCGAT GCGGTCAGCC AGTCAGCCGA TGGTATGGCC
AGCGTCAGCA GTGAGATCGC CTGCAGTTGC GACACCATGT CGGCCATGGC CACCGAGGCC
GAGCAGGTGT CGAAGGAGGG AGAACGGATT ATTTCCGGTA TGTCGGTGGT CATGGGCAGT
ATTGAAGGGG TCATGACCGA GACCACCTCT GCAGTCAAGA ATCTTGGTGC CACCTCCAAC
CAGATCGGCG ATATTCTTTC CACCATCAGT GACATTGCCG ATCAGACCAA CCTGCTGGCC
CTGAATGCCG CCATTGAGGC TGCCCGGGCA GGCGATCAGG GACGTGGTTT TGCCGTGGTG
GCCGATGAGG TCCGTCATCT GGCAGAACGG ACCACCAGTG CCACCCGTGA GATCCAGGGA
ATTATCACTG CCCTGCAGCG GGATGTGCGG GCCGTGGTCG GTTCCATGGA ACAGAGTGCC
GGCAGCGTGC ATGAAGGGGG CGAAGGGGTA CGGCTTTCCT GTGAGGCGAT CGGCAGTATC
CGTGAAAAGA TCGGTGAACT GCTCAGTCAG GTGTCCCATG TCGCTTCTGC CGCTGCCCAG
CAATCAAATT CAACGGTGGC CATCTCCGGC AGCATGCACG GCATTACCTC GGTGATCCGT
GAGGCGGCCC ACGGAGCTGA TGAAACCAGA AACGCTGCTG CCCAGATGGC AGCATCCTCG
GCAGAACTGC AGCAGATGGT CAGCAAATTC CGTATCAACT GA
|
|---|
| Protein sequence | MSFFLDKYLG LKIKTRIYLL CFCYSLCIIF GVGAGRSLPL TYSILTTALF VAAGAFFGGL
LFWSVNEALQ RILGYLKEMT EGNLRQTISA KRNNEISAII RSIATLQTAM QGMISGIRQT
TDSVASASER LRQTAESIAD GTGSAASQSD AVSQSADGMA SVSSEIACSC DTMSAMATEA
EQVSKEGERI ISGMSVVMGS IEGVMTETTS AVKNLGATSN QIGDILSTIS DIADQTNLLA
LNAAIEAARA GDQGRGFAVV ADEVRHLAER TTSATREIQG IITALQRDVR AVVGSMEQSA
GSVHEGGEGV RLSCEAIGSI REKIGELLSQ VSHVASAAAQ QSNSTVAISG SMHGITSVIR
EAAHGADETR NAAAQMAASS AELQQMVSKF RIN
|
|---|
| |